[OMPI users] Memory manager

2008-05-12 Thread Terry Frankcombe
Hi folks I'm trying to run an MPI app on an infiniband cluster with OpenMPI 1.2.6. When run on a single node, this app is grabbing large chunks of memory (total per process ~8.5GB, including strace showing a single 4GB grab) but not using it. The resident memory use is ~40MB per process. When t

Re: [OMPI users] Help configuring openmpi

2008-05-12 Thread Jeff Squyres
If OMPI is spinning consuming 100% of your CPU, it usually means that some MPI function call is polling waiting for completion. Given the pattern you are seeing, I'm wondering if some Open MPI collective call is not finishing until you re-enter the MPI progression engine. Specifically, is

Re: [OMPI users] Compiler Choice in openmpi

2008-05-12 Thread Jeff Squyres
On May 11, 2008, at 12:00 AM, Wen Hao Wang wrote: 1. How can I change/set Fortran compiler used after installing openmpi? I installed openmpi-1.2.5-2 on RHEL5.2 Server with x86_32 arch. The rpm has been shipped RHEL images. I directly installed the rpms without compiling the source code. No

Re: [OMPI users] [OMPI devel] OpenMPI-v1.3.1 Tentatives dates release eversion

2008-05-12 Thread Jeff Squyres
On May 10, 2008, at 2:57 PM, Alberto Giannetti wrote: Please don't CC both mailing lists on future replies to this thread; one or the other would be fine; thanks! Brad Benton and George Bosilca are the release managers for the v1.3 series. They're maintaining a wiki for the v1.3 series here:

Re: [OMPI users] A simple mpi code hangs at MPI_Init?

2008-05-12 Thread Sang Chul Choi
Hi, I think that ubuntu's package version might have some problem. I just downloaded source code from open mpi and it just worked after source installation. Thank you, Sang Chul P.S. The code was as follows. I ran it with $ mpirun -n 2 hello

[OMPI users] Help configuring openmpi

2008-05-12 Thread Juan Carlos Larroya Huguet
Hi, I'm using Openmpi in a linux cluster (itanium 64, intel compilers, 8 processors (4 dual) by node) in which openmpi is not the default ( I mean supported) MPI-II implementation. Openmpi has been installed easily on the cluster but I think there is a problem with the configuration. I'm usi

[OMPI users] [SPAM:### 81%] openmpi multi-lib torque support

2008-05-12 Thread Karolis Eigelis
ello, I have Rocks 4.3 installed. Frontend 32bit and nodes with 64bit. Traying to run openmpi with torque support using multilib. /usr/local shared among nodes CONFIGURING and INSTALL [from frontend 32bit] ./configure --with-tm=/opt/torque/ --prefix=/usr/local/openmpi-1.2.6 -- includedir='${pr