[OMPI users] problems with establishing an intercommunicator

2011-03-08 Thread Waclaw Kusnierczyk
Hello, I'm trying to connect two independent MPI process groups with an intercommunicator, using ports, as described in sec. 10.4 of the MPI standard. One group runs a server, the other a client. The server opens a port, publishes the port's name, and waits for a connection. The client obt

Re: [OMPI users] Problem running openmpi-1.4.3

2011-03-08 Thread Gus Correa
Ralph Castain wrote: You need to set your LD_LIBRARY_PATH to point to where you installed openmpi. On Mar 8, 2011, at 5:47 PM, Amos Leffler wrote: Hi, I am trying to get openmpi-1.4.3 to run but am having trouble. It is run using SUSE-11.3 with Intel XE-2011 Composer C and Fortran comp

Re: [OMPI users] Problem running openmpi-1.4.3

2011-03-08 Thread Ralph Castain
You need to set your LD_LIBRARY_PATH to point to where you installed openmpi. On Mar 8, 2011, at 5:47 PM, Amos Leffler wrote: > Hi, >I am trying to get openmpi-1.4.3 to run but am having trouble. > It is run using SUSE-11.3 with Intel XE-2011 Composer C and Fortran > compilers. The comp

Re: [OMPI users] Problem running openmpi-1.4.3

2011-03-08 Thread David Zhang
you need to set your LD_LIBRARY_PATH to contain the MPI libraries. The more experienced MPI users in this mailing list would tell you what to include. On Tue, Mar 8, 2011 at 4:47 PM, Amos Leffler wrote: > Hi, >I am trying to get openmpi-1.4.3 to run but am having trouble. > It is run u

[OMPI users] Problem running openmpi-1.4.3

2011-03-08 Thread Amos Leffler
Hi, I am trying to get openmpi-1.4.3 to run but am having trouble. It is run using SUSE-11.3 with Intel XE-2011 Composer C and Fortran compilers. The compilers installed without problems. The openmpi file was downloaded and unzipped and untarred. The ./configure command was run and it w

Re: [OMPI users] MPI_ALLREDUCE bug with 1.5.2rc3r24441

2011-03-08 Thread Jeff Squyres
Try as I might, I cannot reproduce this error. :-( I only have the intel compiler version 11.x, though -- not 12. Can you change your test to use MPI_Reduce_local with INTEGER8 and see if the problem still occurs? (it probably will, but it is a significantly simpler code path to get down to t

Re: [OMPI users] multi-threaded programming

2011-03-08 Thread Eugene Loh
Durga Choudhury wrote: A follow-up question (and pardon if this sounds stupid) is this: If I want to make my process multithreaded, BUT only one thread has anything to do with MPI (for example, using OpenMP inside MPI), then the results will be correct EVEN IF #1 or #2 of Eugene holds true.

Re: [OMPI users] multi-threaded programming

2011-03-08 Thread Durga Choudhury
A follow-up question (and pardon if this sounds stupid) is this: If I want to make my process multithreaded, BUT only one thread has anything to do with MPI (for example, using OpenMP inside MPI), then the results will be correct EVEN IF #1 or #2 of Eugene holds true. Is this correct? Thanks Durg

[OMPI users] multi-threaded programming

2011-03-08 Thread Eugene Loh
Let's say you have multi-threaded MPI processes, you request MPI_THREAD_MULTIPLE and get MPI_THREAD_MULTIPLE, and you use the self,sm,tcp BTLs (which have some degree of threading support). Is it okay to have an [MPI_Isend|MPI_Irecv] on one thread be completed by an MPI_Wait on another thread?

Re: [OMPI users] Two Instances of Same Process Rather Than Two SeparateProcesses

2011-03-08 Thread Gus Correa
Jeff Squyres (jsquyres) wrote: This usually indicates a mismatch of MPI installations - eg, you compiled against one MPI installation but then accidentally used the mpirun from a different MPI installation. Sent from my phone. No type good. On Mar 8, 2011, at 4:36 AM, "Clark Britan" wrote:

Re: [OMPI users] Two Instances of Same Process Rather Than Two SeparateProcesses

2011-03-08 Thread Jeff Squyres (jsquyres)
This usually indicates a mismatch of MPI installations - eg, you compiled against one MPI installation but then accidentally used the mpirun from a different MPI installation. Sent from my phone. No type good. On Mar 8, 2011, at 4:36 AM, "Clark Britan" wrote: > I just installed OpenMPI on m

Re: [OMPI users] Number of processes and spawn

2011-03-08 Thread Federico Golfrè Andreasi
Hi Ralph, I've did some more tests, hope this can help. *Using OpenMPI-1.5* - The program works correctly doing a multiple spawn up to 128 cpus. - When spawning to more than 129 cpus it hungs during the spawn. I've discovered that just before the spwaning all the processes liying on one node

[OMPI users] Two Instances of Same Process Rather Than Two Separate Processes

2011-03-08 Thread Clark Britan
I just installed OpenMPI on my Linux Ubuntu 10.04 LTS 64 bit computer. I downloaded the most recent version of OpenMPI and ran the configure and make commands. I then tried to run a CFD software called FDS using 2 of the 12 available processors (single node) as a test. I split my computational do

[OMPI users] Segmentation faults

2011-03-08 Thread arep isa
Hi, I need to use Open MPI to distribute 2d-array in the PGM file among 10 working computers. Then I need to manipulate each value of the array to get a negative image (255-i) and then print the output back. I'm thinking of using mpi_scatterv and mpi_gatherv to distribute the data. After i compile