Re: [OMPI users] openmpi self checkpointing - error while running example

2011-05-24 Thread Faisal
Hellmüller Roman student.ethz.ch> writes: > > Hi > > I'm trying to get fault tolerant ompi running on our cluster for my semesterthesis. > > Build & compile were successful, blcr checkpointing works. openmpi 1.5.3, > blcr 0.8.2 > > Now i'm trying to set up the SELF checkpointing. the

Re: [OMPI users] reading from file

2011-05-24 Thread sushil samant
hi rob thanks a lot . But if you give some example with .h5 read in c++ or fortran, it will help a lot. On 5/24/11, users-requ...@open-mpi.org wrote: > Send users mailing list submissions to > us...@open-mpi.org > > To subscribe or unsubscribe via the World Wide

Re: [OMPI users] openmpi (1.2.8 or above) and Intel composer XE 2011 (aka 12.0)

2011-05-24 Thread Marcus R. Epperson
On 05/19/2011 07:37 PM, Jeff Squyres wrote: Other users have seen something similar but we have never been able to reproduce it. Is this only when using IB? Actually no, when I use --mca btl tcp,sm,self it hangs in the same place. If you use "mpirun --mca btl_openib_cpc_if_include rdmacm",

Re: [OMPI users] Trouble with MPI-IO

2011-05-24 Thread Tom Rosmond
Rob, Thanks for the clarification. I had seen that point about non-decreasing offsets in the standard and it was just beginning to dawn on me that maybe it was my problem. I will rethink my mapping strategy to comply with the restriction. Thanks again. T. Rosmond On Tue, 2011-05-24 at 10:09

Re: [OMPI users] Openib with > 32 cores per node

2011-05-24 Thread Dave Love
Jeff Squyres writes: > Assuming you built OMPI with PSM support: > > mpirun --mca pml cm --mca mtl psm > > (although probably just the pml/cm setting is sufficient -- the mtl/psm > option will probably happen automatically) For what it's worth, you needn't specify

Re: [OMPI users] reading from a file

2011-05-24 Thread Rob Latham
On Sat, May 21, 2011 at 05:15:13PM +0530, sushil samant wrote: > hi all, > i am a new comer in openmpi programing.i have a txt file containing > seven column each column contains double type data. What i want to do > is to read the file in parallel and find the average value and > standard

Re: [OMPI users] Trouble with MPI-IO

2011-05-24 Thread Rob Latham
On Fri, May 20, 2011 at 08:14:07AM -0400, Jeff Squyres wrote: > On May 20, 2011, at 6:23 AM, Jeff Squyres wrote: > > > Shouldn't ijlena and ijdisp be 1D arrays, not 2D arrays? > > Ok, if I convert ijlena and ijdisp to 1D arrays, I don't get the compile > error (even though they're allocatable

Re: [OMPI users] btl_openib_cpc_include rdmacm questions

2011-05-24 Thread Dave Love
Brock Palen writes: > Well I have a new wrench into this situation. > We have a power failure at our datacenter took down our entire system > nodes,switch,sm. > Now I am unable to produce the error with oob default ibflags etc. As far as I know, we could still reproduce it.

Re: [OMPI users] openmpi (1.2.8 or above) and Intel composer XE 2011 (aka 12.0)

2011-05-24 Thread Salvatore Podda
OK! I catch the meaning of the "--mca btl_openib_cpc_include rdmacm" parameter. Howerver, as I just said, we are doing, in the meanwhile, several IMB tests on openmpi 1.2.8 and on this (our) version either the RDMA CM support is not implemented or has not been included in the compilation

Re: [OMPI users] users Digest, Vol 1911, Issue 3

2011-05-24 Thread Salvatore Podda
Sorry for the late reply, but, as I just say, we are attempting to recover the full operation of part of our cluster Yes, it was a typo, I use to add the "sm" flag to the "--mca btl" option. However I think this is not mandatory, as I suppose openmpi use the the so-called "Law of Least

Re: [OMPI users] MPI_COMM_DUP freeze with OpenMPI 1.4.1

2011-05-24 Thread francoise.r...@obs.ujf-grenoble.fr
Jeff Squyres wrote: On May 13, 2011, at 8:31 AM, francoise.r...@obs.ujf-grenoble.fr wrote: Here is the MUMPS portion of code (in zmumps_part1.F file) where the slaves call MPI_COMM_DUP , id%PAR and MASTER are initialized to 0 before : CALL MPI_COMM_SIZE(id%COMM, id%NPROCS, IERR ) I