Re: [OMPI users] OpenMPI 2.1.0: FAIL: opal_path_nfs

2017-04-26 Thread r...@open-mpi.org
We have a utility that checks to ensure that the shared memory backing file is not on a shared file system. The test is checking to see if that utility can stat and assess the nature of any file system on your node. It’s undoubtedly stale as things have changed over the years (new file systems a

Re: [OMPI users] OpenMPI 2.1.0: FAIL: opal_path_nfs

2017-04-26 Thread Prentice Bisbal
That's what I figured, but I wanted to check first. Any idea of exactly what it's trying to check? Prentice On 04/26/2017 05:54 PM, r...@open-mpi.org wrote: You can probably safely ignore it. On Apr 26, 2017, at 2:29 PM, Prentice Bisbal wrote: I'm trying to build OpenMPI 2.1.0 with GCC 5.4

Re: [OMPI users] OpenMPI 2.1.0: FAIL: opal_path_nfs

2017-04-26 Thread r...@open-mpi.org
You can probably safely ignore it. > On Apr 26, 2017, at 2:29 PM, Prentice Bisbal wrote: > > I'm trying to build OpenMPI 2.1.0 with GCC 5.4.0 on CentOS 6.8. After working > around the '-Lyes/lib' errors I reported in my previous post, opal_path_nfs > fails during 'make check' (see below). Is t

Re: [OMPI users] OpenMPI 2.1.0 build error: yes/lib: No such file or director

2017-04-26 Thread Prentice Bisbal
Edgar, Thank you for the suggestion. That fixed this problem. Prentice On 04/26/2017 05:25 PM, Edgar Gabriel wrote: Can you try to just skip the --with-lustre option ? The option really is there to provide an alternative path, if the lustre libraries are not installed in the default directori

[OMPI users] OpenMPI 2.1.0: FAIL: opal_path_nfs

2017-04-26 Thread Prentice Bisbal
I'm trying to build OpenMPI 2.1.0 with GCC 5.4.0 on CentOS 6.8. After working around the '-Lyes/lib' errors I reported in my previous post, opal_path_nfs fails during 'make check' (see below). Is this failure critical, or is it something I can ignore and continue with my install? Googling only

Re: [OMPI users] OpenMPI 2.1.0 build error: yes/lib: No such file or director

2017-04-26 Thread Edgar Gabriel
Can you try to just skip the --with-lustre option ? The option really is there to provide an alternative path, if the lustre libraries are not installed in the default directories ( e.g. --with-lustre=/opt/lustre/). There is obviously a bug that the system did not recognize the missing arg

[OMPI users] OpenMPI 2.1.0 build error: yes/lib: No such file or director

2017-04-26 Thread Prentice Bisbal
I'm getting the following error when I build OpenMPI 2.1.0 with GCC 5.4.0: /bin/sh ../../../../libtool --tag=CC --mode=link gcc -O3 -DNDEBUG -finline-functions -fno-strict-aliasing -pthread -module -avoid-version -Lyes/lib -o libmca_fs_lustre.la fs_lustre.lo fs_lustre_component.lo fs_lus

Re: [OMPI users] Compiler error with PGI: pgcc-Error-Unknown switch: -pthread

2017-04-26 Thread Prentice Bisbal
Everyone, I just wanted to follow up on this, to help others, or possibly even a future me, having problems compiling OpenMPI with the PGI compilers. I did get it to work a few weeks ago, but I've been too busy to share my solution here. I need to give a shout out to Matt Thompson for provid