[OMPI users] Strange recursive "no" error message when compiling 1.5 series with fault tolerance enabled

2012-01-26 Thread David Akin
I can build OpenMPI with FT on my system if I'm using 1.4 source, but if I use any of the 1.5 series, I get hung in a strange "no" loop at the beginning of the compile (see below): + ./configure --build=x86_64-unknown-linux-gnu --host=x86_64-unknown-linux-gnu --target=x86_64-redhat-linux-gnu --pr

Re: [OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-08-10 Thread David Akin
Solved: The process to core locking was due to affinity being set at the PSM layer. So I added -x IPATH_NO_CPUAFFINITY=1 to the mpirun command. Dave On Wed, Aug 4, 2010 at 12:13 PM, Eugene Loh wrote: > > David Akin wrote: > >> All, >> I'm trying to get the OpenMP po

Re: [OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-29 Thread David Akin
e bound. It appears > that MPI_Get_processor_name is simply returning the name of the node as > opposed to the name/id of any specific core. How do you know what core the > thread is actually executing on? > > > > This would tell you if your code was bouncing between cores. > > On J

Re: [OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-29 Thread David Akin
ph, as to why no options is > causing your code bind. Maybe add a --report-bindings to your mpirun line > to see what OMPI thinks it is doing in this regard? > > > This is a good suggestion - I'm beginning to believe that the binding is > happening in the user's app a

Re: [OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-29 Thread David Akin
estion - I'm beginning to believe that the binding is > happening in the user's app and not OMPI. > > > --td > > --td > > On Jul 28, 2010, at 5:47 PM, David Akin wrote: > > > > All, > I'm trying to get the OpenMP portion of the code below to run

Re: [OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-29 Thread David Akin
-not- bind. Check your > default mca param file and your environment. Do you have any mca params set > in them? > > > On Jul 28, 2010, at 9:40 PM, David Akin wrote: > >> Here's the exact command I'm running when all threads *are* pinned to >>

Re: [OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-28 Thread David Akin
ed threads. > > > On Jul 28, 2010, at 5:47 PM, David Akin wrote: > >> All, >> I'm trying to get the OpenMP portion of the code below to run >> multicore on a couple of 8 core nodes. >> >> Good news: multiple threads are being spawned on each node

[OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-28 Thread David Akin
All, I'm trying to get the OpenMP portion of the code below to run multicore on a couple of 8 core nodes. Good news: multiple threads are being spawned on each node in the run. Bad news: each of the threads only runs on a single core, leaving 7 cores basically idle. Sorta good news: if I provide a

[OMPI users] Hybrid OpenMPI / OpenMP run pins OpenMP threads to a single core

2010-07-28 Thread David Akin
All, I'm trying to get the OpenMP portion of the code below to run multicore on a couple of 8 core nodes. Good news: Multiple threads are being spawned on each node in the run. Bad news: Each of the threads only runs on a single core, leaving 7 cores basically idle. Sorta good news: If I provide a