Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

On Fri, Oct 8, 2010 at 8:27 PM, Richard Walsh wrote: > Regarding building HD5 ... the OpenMPI 1.4.1 wrapper using the May 2010 > release of the Intel Compiler Toolkit Cluster Edition (ICTCE) worked for me. > Here is my config.log header: >  $ ./configure CC=mpicc

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

heart pause; > As the heart gives reason fits. > > Yet, to live where reason always rules; > Is to kill one's heart with wits. > > From: users-boun...@open-mpi.org [users-boun...@open-mpi.org] On Behalf Of > Gus Correa [g...@ldeo.columbia.edu]

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

We've been trying to convince people to use thewrappers unless they have a *really, really good* reason not to for years. :( Sent from my PDA. No type good. On Oct 8, 2010, at 1:59 PM, "Gus Correa" wrote: > Jeff Squyres wrote: >> On Oct 8, 2010, at 1:00 PM, Götz

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

] Sent: Friday, October 08, 2010 1:58 PM To: Open MPI Users Subject: Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran Jeff Squyres wrote: > On Oct 8, 2010, at 1:00 PM, Götz Waschk wrote: > >> I have solved this problem myself. The trick is not to use the >> compile

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

Jeff Squyres wrote: On Oct 8, 2010, at 1:00 PM, Götz Waschk wrote: I have solved this problem myself. The trick is not to use the compiler wrappers but icc and ifort directly. But in that case you'll have to link to libmpi_f77 manually and set the variable RUNPARALLEL to a working mpirun

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

On Oct 8, 2010, at 1:00 PM, Götz Waschk wrote: > I have solved this problem myself. The trick is not to use the > compiler wrappers but icc and ifort directly. But in that case you'll > have to link to libmpi_f77 manually and set the variable RUNPARALLEL > to a working mpirun command. Strange.

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

On Wed, Oct 6, 2010 at 4:35 PM, Jeff Squyres wrote: > On Oct 6, 2010, at 10:07 AM, Götz Waschk wrote: >>> Do -Wl,-rpath and -Wl,-soname= work any better? >> Yes, with these options, it build fine. But the command line is >> generated by libtool, so how can I make libtool to

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

On Oct 6, 2010, at 10:07 AM, Götz Waschk wrote: >> Do -Wl,-rpath and -Wl,-soname= work any better? > Yes, with these options, it build fine. But the command line is > generated by libtool, so how can I make libtool to use -Wl, in front > of the linker options? It seems to strip these from the

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

On Wed, Oct 6, 2010 at 2:43 PM, Tim Prince wrote: >> libtool: link: mpif90 -shared  .libs/H5f90global.o >> .libs/H5fortran_types.o .libs/H5_ff.o .libs/H5Aff.o .libs/H5Dff.o >> .libs/H5Eff.o .libs/H5Fff.o .libs/H5Gff.o .libs/H5Iff.o .libs/H5Lff.o >> .libs/H5Off.o .libs/H5Pff.o

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

On 10/6/2010 12:09 AM, Götz Waschk wrote: libtool: link: mpif90 -shared .libs/H5f90global.o .libs/H5fortran_types.o .libs/H5_ff.o .libs/H5Aff.o .libs/H5Dff.o .libs/H5Eff.o .libs/H5Fff.o .libs/H5Gff.o .libs/H5Iff.o .libs/H5Lff.o .libs/H5Off.o .libs/H5Pff.o .libs/H5Rff.o .libs/H5Sff.o

Re: [OMPI users] hdf5 build error using openmpi and Intel Fortran

This looks like something you should take up with the hdf5 people. Sent from my PDA. No type good. On Oct 6, 2010, at 3:09 AM, Götz Waschk wrote: > Hi everyone, > > I'm trying to build hdf5 1.8.5-patch1 on RHEL5 using openmpi 1.4 and > the Intel Compiler suite 11.0.