Am 13.10.2008 um 00:55 schrieb Sean Davis:
On Sat, Oct 11, 2008 at 6:48 PM, Reuti
wrote:
Am 12.10.2008 um 00:21 schrieb Sean Davis:
Thanks, Pak. There is only one queue on the SGE system. Of course,
there are queue instances for each machine, which is the usual for
SGE.
I'll give the -
Dear all,
I have troubles installing rmpi 0.5-5 (or 0.5-6) on a quad opteron machine
with OpenSUSE 11.0 and
R 2.7.2
platform x86_64-unknown-linux-gnu
arch x86_64
os linux-gnu
system x86_64, linux-gnu
status Patched
major 2
minor 7.2
y
We always recommend using the Open MPI "wrapper" compilers instead of
directly using gcc. There are very few scenarios where it is better
to use the native compilers directly.
You might want to check with the RMPI authors for more details; I'm
afraid that I don't know anything about that p
On Oct 11, 2008, at 10:20 AM, Aleksej Saushev wrote:
$ ompi_info | grep oob
MCA oob: tcp (MCA v1.0, API v1.0, Component v1.0)
MCA rml: oob (MCA v1.0, API v1.0, Component v1.2.7)
Good!
Is there a chance that there's some dependent library of oob_rml
that is av
On Mon, Oct 13, 2008 at 8:14 AM, Jeff Squyres wrote:
> We always recommend using the Open MPI "wrapper" compilers instead of
> directly using gcc. There are very few scenarios where it is better to use
> the native compilers directly.
>
> You might want to check with the RMPI authors for more det
On 13 October 2008 at 11:22, Simone Giannerini wrote:
| Dear all,
|
| I have troubles installing rmpi 0.5-5 (or 0.5-6) on a quad opteron machine
| with OpenSUSE 11.0 and
| R 2.7.2
|
| platform x86_64-unknown-linux-gnu
| arch x86_64
| os linux-gnu
| system x86
Dear Dirk,
many thanks for your reply, please see below,
On 13 October 2008 at 11:22, Simone Giannerini wrote:
| Dear all,
|
| I have troubles installing rmpi 0.5-5 (or 0.5-6) on a quad opteron machine
| with OpenSUSE 11.0 and
| R 2.7.2
|
| platform x86_64-unknown-linux-gnu
| arch x86_64
| os l
For the sake of completeness,
Rmpi 0.5-5 does not even find libmpi
gauss:~/Desktop # R CMD INSTALL Rmpi_0.5-5.tar.gz
--configure-args=--with-mpi=/usr/lib64/mpi/gcc/openmpi/
* Installing to library '/usr/local/lib64/R/library'
* Installing *source* package 'Rmpi' ...
checking for gcc... gcc
checki
On Mon, Oct 13, 2008 at 03:56:19PM +0200, Simone Giannerini wrote:
> Dear Dirk,
>
> many thanks for your reply, please see below,
Your mail is basically unreadable / impossible to attribute what is
original and what is cited. Please follow convention and indent.
> On 13 October 2008 at 11:22, S
[...]
> Your mail is basically unreadable / impossible to attribute what is
> original and what is cited. Please follow convention and indent.
I am sorry, I am copy/pasting the messages because I switched off receiving
list mails. I forgot to ask to reply also to my personal address.
Hope this on
On Mon, Oct 13, 2008 at 12:10 PM, Simone Giannerini
wrote:
> [...]
>
>> Your mail is basically unreadable / impossible to attribute what is
>> original and what is cited. Please follow convention and indent.
>
> I am sorry, I am copy/pasting the messages because I switched off receiving
> list mai
On Oct 13, 2008, at 12:18 PM, Sean Davis wrote:
# ln -s /usr/lib64/mpi/gcc/openmpi/lib64/ /usr/lib64/mpi/gcc/
openmpi/lib
# CC="mpicc" R CMD INSTALL Rmpi_0.5-5.tar.gz
--configure-args=--with-mpi=/usr/lib64/mpi/gcc/openmpi/
You can drop the --configure-args. Using the correct mpicc should
t
>>> # ln -s /usr/lib64/mpi/gcc/openmpi/lib64/ /usr/lib64/mpi/gcc/
>>> openmpi/lib
>>> # CC="mpicc" R CMD INSTALL Rmpi_0.5-5.tar.gz
>>> --configure-args=--with-mpi=/usr/lib64/mpi/gcc/openmpi/
>>
>> You can drop the --configure-args. Using the correct mpicc should
>> take care of all the linking, etc
On Mon, Oct 13, 2008 at 12:18:30PM -0400, Sean Davis wrote:
> On Mon, Oct 13, 2008 at 12:10 PM, Simone Giannerini
> wrote:
> > [...]
> >
> >> Your mail is basically unreadable / impossible to attribute what is
> >> original and what is cited. Please follow convention and indent.
> >
> > I am sorry
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