[OMPI users] Valgrind errors related to MPI_Win_allocate_shared

2016-11-14 Thread Joseph Schuchart
All, I am investigating an MPI application using Valgrind and see a load of memory leaks reported in MPI-related code. Please find the full log attached. Some observations/questions: 1) According to the information available at https://www.open-mpi.org/faq/?category=debugging#valgrind_clean

[OMPI users] funny SIGSEGV in 'ompi_info'

2016-11-14 Thread Paul Kapinos
Dear developers, also the following issue is defintely raised by a misconfiguration of Open MPI, SIGSEGV's in 'ompi_info' isn'n a good thing, thus this one mail. Just call: $ export OMPI_MCA_mtl="^tcp,^ib" $ ompi_info --param all all --level 9 ... and take a look at the below core dump of

[OMPI users] An old code compatibility

2016-11-14 Thread Mahmood Naderan
Hi, The following mpifort command fails with a syntax error. It seems that the code is compatible with old gfortran, but I am not aware of that. Any idea about that? mpifort -ffree-form -ffree-line-length-0 -ff2c -fno-second-underscore -I/opt/fftw-3.3.5/include -O3 -c xml.f90 xml.F:641.46:

Re: [OMPI users] An old code compatibility

2016-11-14 Thread Jeff Squyres (jsquyres)
Remember that mpifort is just a wrapper over your underlying fortran compiler. If your fortran compiler can't compile your Fortran code, then neither can mpifort. You can use the "--showme" option to mpifort to show you the command line that it is invoking under the coverts. E.g.:

Re: [OMPI users] Valgrind errors related to MPI_Win_allocate_shared

2016-11-14 Thread D'Alessandro, Luke K
Hi Joesph, I don’t have a solution to your issue, but I’ve found that the valgrind mpi wrapper is necessary to eliminate many of the false positives that the suppressions file can’t. http://valgrind.org/docs/manual/mc-manual.html#mc-manual.mpiwrap.gettingstarted You should LD_PRELOAD the

Re: [OMPI users] An old code compatibility

2016-11-14 Thread Mahmood Naderan
The output is not meaningful for me. If I add --showme option, the output is http://pastebin.com/FX1ks8iW and if I drop --showme, the output is http://pastebin.com/R1QFYVBe Please search for xml.F. Do you have any idea? Regards, Mahmood ___ users

Re: [OMPI users] An old code compatibility

2016-11-14 Thread Jeff Squyres (jsquyres)
On Nov 14, 2016, at 12:19 PM, Mahmood Naderan wrote: > > The output is not meaningful for me. > If I add --showme option, the output is http://pastebin.com/FX1ks8iW --showme does not compile anything. It just shows you what underlying command line *would* be invoked (if