Re: [OMPI users] using specific algorithm for collective communication and knowing the root cpu?

2009-11-04 Thread George Markomanolis
Dear George, Thanks for the answer, I have some questions, because I am using some programs for profiling, when you say that the cost of allreduce raise you mean about the time only or also and the flops of this command? Is there some additional work added at the allreduce or it's only about t

Re: [OMPI users] segmentation fault: Address not mapped

2009-11-04 Thread Iris Pernille Lohmann
Hi Jeff, Thanks for your reply. There are no core files associated with the crash. Based on your answer, and the fact that the crash only appears occasionally, I think I need to debug more carefully as you suggest - it may very well be something not working completely right in the application.

[OMPI users] Question about checkpoint/restart protocol

2009-11-04 Thread Mohamed Adel
Dear OMPI users, I'm a new OpenMPI user. I've configured openmpi-1.3.3 with those options "./configure --prefix=/home/mab/openmpi-1.3.3 --with-sge --enable-ft-thread --with-ft=cr --enable-mpi-threads --enable-static --disable-shared --with-blcr=/home/mab/blcr-0.8.2/" then compiled and installed