Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Yuping Sun
Hi Gus: Can you review the procedures I went through to install and let me know where it went wrong? Procedures: Step 1: Download Open link http://www.open-mpi.org/software/ompi/v1.6/ You will see Click openmpi-1.6.5.tar.gz And download the tar file. Step 2: prepare to install $ cd ~ys

Re: [OMPI users] libtool:line1128 gfortran command not found

2013-07-25 Thread meng
My problem is solved. As my program does not use fortran, by running 'configure --disable-mpi-f77 --disable-mpi-f90', I solved make problem. and then set environment as in http://hi.baidu.com/yoghurt117/item/bc666233a7e8af302e0f81c0. i succeed in installing openmpi. At 2013-07-26 00:06:55,"

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Gus Correa
Hi Yuping Hmmm... I think the last release in the 1.4.X series was 1.4.5. I don't remember any 1.4.7. Is it a typo in your email. In any case, I always install OpenMPI from source code. It works like a charm, and is trouble-free. I am not familiar to the OpenMPI packages from the various Linux d

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Yuping Sun
Hi Gus: I use yum install to install openmpi 1.4.7 and it went through. Then I tested a small code, hello world, and it worked. Now I have two questions for you: 1. do we have a openmpi 1.6.5 rpm package so I can use rpm or yum to install? 2. do you know how to specify the directory to install o

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Gus Correa
Hi Yuping Something seems to be broken in the way you set your environment variables. We use .bashrc/.tcshrc for this. For what is worth, the bash man page says: *** "When bash is invoked as an interactive login shell, or as a non-inter- active shell with the --login option, it first reads and

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Yuping Sun
Hi Gus: Thank you. I did these as I use .bash_profile to add the path and LD, but it did not help. Thank you. Is there anything else you can think of? Best regards, Yuping -Original Message- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of Gus Correa

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Gus Correa
Hi Yuping A simple way to do it is to put in your initialization files, which are hidden ("dot files") in your home directory. It depends on the shell you use (do 'echo $SHELL' to see). If bash, .bashrc export PATH=/usr/local/openmpi1.6.5/bin:${PATH} export LD_LIBRARY_PATH=/usr/local/openmpi1.

Re: [OMPI users] UnsatisfiedLinkError - libmpi_java.so.0.0.0

2013-07-25 Thread Saliya Ekanayake
Thank you. I tested a recent version and it worked. Saliya On Tue, Jul 23, 2013 at 2:30 PM, Ralph Castain wrote: > I suspect it has fallen stale as the Java bindings are being reworked as > we speak. I hope to see them committed back to the trunk shortly. > > > On Jul 20, 2013, at 10:01 PM, Sa

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Yuping Sun
Hi Gus: I went back and set the PATH and LD_LIBRARY_PATH following the FAQ answer. However, it did not change anything. What else can you suggest? Thank you. Yuping -Original Message- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of Gus Correa Sent:

Re: [OMPI users] errors testing openmpi1.6.5 ----

2013-07-25 Thread Yuping Sun
Hi Ralph: Here is what I got: ls /usr/local/openmpi1.6.5/lib/ libmca_common_sm.a libmpi.a libmpi_cxx.la libmpi_f77.la libmpi_f90.la libompitrace.a libopen-pal.a libopen-rte.a libopen-trace-format.a libotfaux.a libvt.a libvt-hyb.la libvt-mpi.a libvt-mpi-unify.a lib

Re: [OMPI users] libtool:line1128 gfortran command not found

2013-07-25 Thread Jeff Squyres (jsquyres)
A guess: you probably need to export your PATH variable in your .bashrc, not just set it. On Jul 25, 2013, at 11:24 AM, meng wrote: > Dear Ralph, > Thank you for the reply. I have added the path to gcc to .bashrc at > $HOME directory and gfortran can run anywhere. > But I did not k

Re: [OMPI users] libtool:line1128 gfortran command not found

2013-07-25 Thread meng
Dear Ralph, Thank you for the reply. I have added the path to gcc to .bashrc at $HOME directory and gfortran can run anywhere. But I did not know what environment has PATH=/usr/bin:/bin. Maybe this is far from the correct way. Regards, meng At 2013-07-25 21:58:16,"Ralph Casta

Re: [OMPI users] libtool:line1128 gfortran command not found

2013-07-25 Thread Ralph Castain
you need to add the path to your gcc to your $PATH environment, and then re-run configure On Jul 25, 2013, at 5:36 AM, meng wrote: > Hi all, > I am trying to install openmpi and come upone many problems. One is about > the Fortran 77 compiler in configure stage, I solved it by editing .bas

[OMPI users] libtool:line1128 gfortran command not found

2013-07-25 Thread meng
Hi all, I am trying to install openmpi and come upone many problems. One is about the Fortran 77 compiler in configure stage, I solved it by editing .bashrc, changing from $GCCHOME/lib to $GCCHOME/lib64. Of course your os should be 64-bits. After configure, when running make all install, t