Re: [OMPI users] configure fails to detect missing libcrypto

[Gus Correa]

Hi

In case this matters,
ldd on my Torque 4.2.5 libtorque.so shows:
libcrypto.so.10 => /usr/lib64/libcrypto.so.10
plus a few kerberos crypto libraries, etc.
May be because I built Torque with PAM module support?
Anyway, I have built OMPI up to 1.6.5 with that Torque support
with no problem.
Could your libcrypto be in an an unusual location?
Maybe you need to load a Torque environment module to add it to your 
LD_LIBRARY_PATH before you build OMPI?


Gus Correa


On 07/24/2014 05:18 PM, Jeff Hammond wrote:

That could be the case.  I've reported the missing libcrypto issue to
NERSC already.  But neither Intel MPI nor MVAPICH care about libcrypto
and they are both supporting PBS, so I'm not entirely convinced that
PBS depends upon it.

Thanks,

Jeff

Subject: Re: [OMPI users] configure fails to detect missing libcrypto
From: Ralph Castain (rhc_at_[hidden])
Date: 2014-07-24 17:12:16

Previous message: Jeff Hammond: "[OMPI users] configure fails to
detect missing libcrypto"
In reply to: Jeff Hammond: "[OMPI users] configure fails to detect
missing libcrypto"
I'm not aware of our tm module requiring libcrypto - is this something
specific to your PBS install, so it wants to pull libcrypto in when we
link against the Torque lib?

On Jul 24, 2014, at 1:49 PM, Jeff Hammond  wrote:

I am trying to build Open MPI SVN trunk on NERSC Babbage with PBS
support. configure completes without error but the build fails
because libcrypto.so is missing.

I consider it a desirable property that configure detect all the
necessary dependencies for a build to complete, rather than defer
errors to the compilation phase.

I will file a Trac ticket as soon as my account is reset (in-progress).

Making all in mca/plm/tm
make[2]: Entering directory
`/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
CC plm_tm_component.lo
CC plm_tm_module.lo
CCLD mca_plm_tm.la
ld: cannot find -lcrypto
make[2]: *** [mca_plm_tm.la] Error 1
make[2]: Leaving directory
`/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory
`/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte'
make: *** [all-recursive] Error 1

Thanks,

Jeff

--
Jeff Hammond
jeff.science_at_[hidden]
http://jeffhammond.github.io/
___
users mailing list
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Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
Link to this post: 
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Re: [OMPI users] configure fails to detect missing libcrypto

[Jeff Hammond]

That could be the case.  I've reported the missing libcrypto issue to
NERSC already.  But neither Intel MPI nor MVAPICH care about libcrypto
and they are both supporting PBS, so I'm not entirely convinced that
PBS depends upon it.

Thanks,

Jeff

Subject: Re: [OMPI users] configure fails to detect missing libcrypto
From: Ralph Castain (rhc_at_[hidden])
List-Post: users@lists.open-mpi.org
Date: 2014-07-24 17:12:16

Previous message: Jeff Hammond: "[OMPI users] configure fails to
detect missing libcrypto"
In reply to: Jeff Hammond: "[OMPI users] configure fails to detect
missing libcrypto"
I'm not aware of our tm module requiring libcrypto - is this something
specific to your PBS install, so it wants to pull libcrypto in when we
link against the Torque lib?

On Jul 24, 2014, at 1:49 PM, Jeff Hammond  wrote:
> I am trying to build Open MPI SVN trunk on NERSC Babbage with PBS
> support. configure completes without error but the build fails
> because libcrypto.so is missing.
>
> I consider it a desirable property that configure detect all the
> necessary dependencies for a build to complete, rather than defer
> errors to the compilation phase.
>
> I will file a Trac ticket as soon as my account is reset (in-progress).
>
> Making all in mca/plm/tm
> make[2]: Entering directory
> `/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
> CC plm_tm_component.lo
> CC plm_tm_module.lo
> CCLD mca_plm_tm.la
> ld: cannot find -lcrypto
> make[2]: *** [mca_plm_tm.la] Error 1
> make[2]: Leaving directory
> `/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
> make[1]: *** [all-recursive] Error 1
> make[1]: Leaving directory
> `/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte'
> make: *** [all-recursive] Error 1
>
> Thanks,
>
> Jeff
>
> --
> Jeff Hammond
> jeff.science_at_[hidden]
> http://jeffhammond.github.io/
> ___
> users mailing list
> users_at_[hidden]
> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
> Link to this post: 
> http://www.open-mpi.org/community/lists/users/2014/07/24864.php

-- 
Jeff Hammond
jeff.scie...@gmail.com
http://jeffhammond.github.io/

Re: [OMPI users] configure fails to detect missing libcrypto

[Ralph Castain]

I'm not aware of our tm module requiring libcrypto - is this something specific 
to your PBS install, so it wants to pull libcrypto in when we link against the 
Torque lib?

On Jul 24, 2014, at 1:49 PM, Jeff Hammond  wrote:

> I am trying to build Open MPI SVN trunk on NERSC Babbage with PBS
> support.  configure completes without error but the build fails
> because libcrypto.so is missing.
> 
> I consider it a desirable property that configure detect all the
> necessary dependencies for a build to complete, rather than defer
> errors to the compilation phase.
> 
> I will file a Trac ticket as soon as my account is reset (in-progress).
> 
> Making all in mca/plm/tm
> make[2]: Entering directory
> `/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
>  CC   plm_tm_component.lo
>  CC   plm_tm_module.lo
>  CCLD mca_plm_tm.la
> ld: cannot find -lcrypto
> make[2]: *** [mca_plm_tm.la] Error 1
> make[2]: Leaving directory
> `/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
> make[1]: *** [all-recursive] Error 1
> make[1]: Leaving directory
> `/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte'
> make: *** [all-recursive] Error 1
> 
> Thanks,
> 
> Jeff
> 
> -- 
> Jeff Hammond
> jeff.scie...@gmail.com
> http://jeffhammond.github.io/
> ___
> users mailing list
> us...@open-mpi.org
> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
> Link to this post: 
> http://www.open-mpi.org/community/lists/users/2014/07/24864.php

[OMPI users] configure fails to detect missing libcrypto

[Jeff Hammond]

I am trying to build Open MPI SVN trunk on NERSC Babbage with PBS
support.  configure completes without error but the build fails
because libcrypto.so is missing.

I consider it a desirable property that configure detect all the
necessary dependencies for a build to complete, rather than defer
errors to the compilation phase.

I will file a Trac ticket as soon as my account is reset (in-progress).

Making all in mca/plm/tm
make[2]: Entering directory
`/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
  CC   plm_tm_component.lo
  CC   plm_tm_module.lo
  CCLD mca_plm_tm.la
ld: cannot find -lcrypto
make[2]: *** [mca_plm_tm.la] Error 1
make[2]: Leaving directory
`/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte/mca/plm/tm'
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory
`/chos/global/u1/j/jhammond/MPI/ompi-trunk/build-intel/orte'
make: *** [all-recursive] Error 1

Thanks,

Jeff

-- 
Jeff Hammond
jeff.scie...@gmail.com
http://jeffhammond.github.io/


config.log.tbz
Description: Binary data

Re: [OMPI users] openib component not available

[Mike Dubman]

Hi,
The openib btl is not compatible with "thread multiple" paradigm.
You need to use mxm (lib on top of verbs) for ompi and threads.

mxm is part of MOFED or you can download HPCX package (tarball of ompi +
mxm) from http://mellanox.com/products/hpcx

M


On Thu, Jul 24, 2014 at 1:06 PM, madhurima madhunapanthula <
erankima...@gmail.com> wrote:

>
> Hi,
>
>
> I am trying to setup openmpi 1.8.1 on a system with infiniband.
>
> The configure option I am using is
>
> ./configure  --enable-mpi-thread-multiple
>
>
> After installation,  it is not showing any openib BTL component when I use
> the command:
> 'ompi_info --param btl openib'
>
>
> On the same machine, I have also installed openmpi 1.6.5. When i issue the
> command 'ompi_info --param btl openib' from this setup, it lists many
> openib components.
>
> Should I use any flag/option to enable openib in openmpi1.8.1?
>
>
>
> --
> Lokah samasta sukhinobhavanthu
>
> Thanks,
> Madhurima
>
> ___
> users mailing list
> us...@open-mpi.org
> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/users
> Link to this post:
> http://www.open-mpi.org/community/lists/users/2014/07/24861.php
>

[OMPI users] problem with openmpi-1.8.2rc2 on Solaris 10 Sparc

[Siegmar Gross]

Hi,

today I installed openmpi-1.8.2rc2 on my machines (Solaris 10 Sparc,
Solaris 10 x86_64, and openSUSE Linux 12.1 x86_64) with Sun C 5.12
and gcc-4.9.0. I still have the same problems which I reported
yesterday for openmpi-1.8.2rc2r32288.


tyr hello_1 111 ompi_info | grep MPI:
Open MPI: 1.8.2rc2
tyr hello_1 112 mpiexec -np 2 a.out 
Process 0 of 2 running on tyr.informatik.hs-fulda.de
Process 1 of 2 running on tyr.informatik.hs-fulda.de


Now 1 slave tasks are sending greetings.

ld.so.1: a.out: fatal: relocation error: file 
/usr/local/openmpi-1.8.2_64_cc/lib64/openmpi/mca_pml_ob1.so: symbol alloca: 
referenced symbol not found
ld.so.1: a.out: fatal: relocation error: file 
/usr/local/openmpi-1.8.2_64_cc/lib64/openmpi/mca_pml_ob1.so: symbol alloca: 
referenced symbol not found
--
mpiexec noticed that process rank 0 with PID 27867 on node tyr exited on signal 
9 (Killed).
--
tyr hello_1 113 



Everything works fine for an older version.

tyr hello_1 108 ompi_info | grep MPI:
Open MPI: 1.8.2a1r31804
tyr hello_1 109 mpicc hello_1_mpi.c 
tyr hello_1 110 mpiexec -np 2 a.out 
Process 1 of 2 running on tyr.informatik.hs-fulda.de
Process 0 of 2 running on tyr.informatik.hs-fulda.de

Now 1 slave tasks are sending greetings.

Greetings from task 1:
  message type:3
  msg length:  136 characters
  message: 
hostname:  tyr.informatik.hs-fulda.de
operating system:  SunOS
release:   5.10
processor: sun4u

tyr hello_1 111 


I would be grateful if somebody can fix the problem. Thank you
very much for any help in advance.


Kind regards

Siegmar

[OMPI users] openib component not available

[madhurima madhunapanthula]

Hi,


I am trying to setup openmpi 1.8.1 on a system with infiniband.

The configure option I am using is

./configure  --enable-mpi-thread-multiple


After installation,  it is not showing any openib BTL component when I use
the command:
'ompi_info --param btl openib'


On the same machine, I have also installed openmpi 1.6.5. When i issue the
command 'ompi_info --param btl openib' from this setup, it lists many
openib components.

Should I use any flag/option to enable openib in openmpi1.8.1?



-- 
Lokah samasta sukhinobhavanthu

Thanks,
Madhurima