Hi Sunita,
have you tried running "ldconfig"?
Manik Mayur
2010/8/16 <sun...@chem.iitb.ac.in>:
> Hi,
>
>> hello Sunita,
>>
>> what linux distribution is this?
> The linux distribution is Red Hat Enterprise Linux Server release 5.5
> (Tikanga)
>>
>> On Fri, Aug 13, 2010 at 1:57 AM, <sun...@chem.iitb.ac.in> wrote:
>>
> Thanks,
> Sunita
>
>>> Dear Open-mpi users,
>>>
>>> I installed openmpi-1.4.1 in my user area and then set the path for
>>> openmpi in the .bashrc file as follow. However, am still getting
>>> following
>>> error message whenever am starting the parallel molecular dynamics
>>> simulation using GROMACS. So every time am starting the MD job, I need
>>> to
>>> source the .bashrc file again.
>>>
>>> Earlier in some other machine I did the same thing and was not getting
>>> any
>>> problem.
>>>
>>> Could you guys suggest what would be the problem?
>>>
>>> .bashrc
>>> #path for openmpi
>>> export PATH=$PATH:/home/sunitap/soft/openmpi/bin
>>> export CFLAGS="-I/home/sunitap/soft/openmpi/include"
>>> export LDFLAGS="-L/home/sunitap/soft/openmpi/lib"
>>> export LD_LIBRARY_PATH=/home/sunitap/soft/openmpi/lib:$LD_LIBRARY_PATH
>>>
>>> == error message ==
>>> mdrun_mpi: error while loading shared libraries: libmpi.so.0: cannot
>>> open
>>> shared object file: No such file or directory
>>>
>>>
>>>
>>> Thanks for any help.
>>> Best regards,
>>> Sunita
>>>
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>>>
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