First of all, I really want to thank Gilles, Thomas and Gus for their time in
helping me as much as possible with my problem.
Problem was resolved. Actually, i have forgotten to include the libraries in
the PBS script.. The cluster we have provides modules of libraries such as :
Hi Elie
Besides Gilles' and Thomas' suggestions:
1) Do you have any file system in your cluster head node that is an
NFS export, and presumably mounted on the compute nodes?
If you do, that would be the best place to install the Intel compiler.
This would make it available on the compute
On 3/24/2016 12:01 AM, Gilles Gouaillardet wrote:
> Elio,
>
> usually, /opt is a local filesystem, so it is possible /opt/intel is
> only available on your login nodes.
>
> your best option is to ask your sysadmin where the mkl libs are on the
> compute nodes, and/or how to use mkl in your jobs.
Hello,
On 03/24/2016 03:22 AM, Gilles Gouaillardet wrote:
it seems /opt/intel/composer_xe_2013_sp1/bin/compilervars.sh is only available
on your login/frontend nodes,
but not on your compute nodes.
you might be luckier with
/opt/intel/mkl/bin/mklvars.sh
an other option is to
ldd
Elio,
usually, /opt is a local filesystem, so it is possible /opt/intel is
only available on your login nodes.
your best option is to ask your sysadmin where the mkl libs are on the
compute nodes, and/or how to use mkl in your jobs.
feel free to submit a dumb pbs script
ls -l /opt
ls -l
Dear Gilles,
thanks for your reply and your options. I have tried the first option, hich for
me basically is the easiest. I have compiled using "make.inc" but now setting
LIB = -L/opt/intel/mkl/lib/intel64 -lmkl_blas95_lp64 -lmkl_lapack95_lp64
-lmkl_intel_lp64 -lmkl_core -lmkl_sequential
Elio,
it seems /opt/intel/composer_xe_2013_sp1/bin/compilervars.sh is only
available on your login/frontend nodes,
but not on your compute nodes.
you might be luckier with
/opt/intel/mkl/bin/mklvars.sh
an other option is to
ldd /home/emoujaes/Elie/SPRKKR/bin/kkrscf6.3MPI
on your login node,
