The root cause is configure cannot run a simple Fortran program
(see the relevant log below)
I suggest you
export LD_LIBRARY_PATH=/share/apps/gcc-5.4.0/lib64:$LD_LIBRARY_PATH
and then try again.
Cheers,
Gilles
configure:44254: checking Fortran value of selected_int_kind(4)
configure:44281: /share/apps/gcc-5.4.0/bin/gfortran -o conftest
-L/share/apps/gcc-5.4.0/lib64 conftest.f90 -lz >&5
configure:44281: $? = 0
configure:44281: ./conftest
./conftest: /usr/lib64/libgfortran.so.3: version `GFORTRAN_1.4' not
found (required by ./conftest)
configure:44281: $? = 1
configure: program exited with status 1
configure: failed program was:
| program main
|
| open(8, file="conftest.out")
| write(8, fmt="(I5)") selected_int_kind(4)
| close(8)
|
| end
configure:44303: result: no
configure:44314: WARNING: Could not determine KIND value of C_SIGNED_CHAR
configure:44316: WARNING: See config.log for more details
configure:44318: error: Cannot continue
On Sun, Apr 21, 2019 at 9:32 AM Guido granda muñoz via users
wrote:
>
> Hello openmpi users,
> I recently got an error during the instalation of openmpi-4.0.0. The error
> showed up during the configuration.
> My configuration options are the following:
> $ ./configure
> --prefix=/home/guido/libraries/compiled_with_gcc-5.4.0/openmpi-4.0.0
> --enable-fortran=all FC=/share/apps/gcc-5.4.0/bin/gfortran
> CC=/share/apps/gcc-5.4.0/bin/gcc CXX=/share/apps/gcc-5.4.0/bin/g++
> CPPFLAGS=-I/share/apps/gcc-5.4.0/include LDFLAGS=-L/share/apps/gcc-5.4.0/lib64
> The gcc version used is : gcc version 5.4.0
>
> I got the following error:
>
> 1)
> configure:7047: /share/apps/gcc-5.4.0/bin/gcc -E
> -I/share/apps/gcc-5.4.0/include conftest.c
> conftest.c:10:28: fatal error: ac_nonexistent.h: No such file or directory
> compilation terminated.
> 2)
> conftest.c:88:19: fatal error: /cuda.h: No such file or directory
>
> The full content of my log file can be download from:
>
> https://pastebin.com/9Gu62FTT?fbclid=IwAR3ajK2-S2t-wzRxBsq1g0_Fw54YC2kr0YwPuxO-xhJKKpb0QEY7uZkpirA
>
> Information about my system:
>
> $ uname -a
> Linux mouruka.crya.privado 2.6.32-504.16.2.el6.x86_64 #1 SMP Wed Apr 22
> 06:48:29 UTC 2015 x86_64 x86_64 x86_64 GNU/Linux
>
> I hope you can help me to figure out what is wrong with my configuration
> options or if something else
> is wrong. I am not an expert so please be answer accordingtly.
>
> Cheers,
>
>
> --
> Guido
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