Re: [OMPI users] suggested intel compiler version for openmpi-1.2.4
> -Original Message- > From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On > Behalf Of Jeff Squyres > > If Intel is telling you that they don't support your glibc version, I > wouldn't be surprised by random segv's in any application that you > build on that platform (including Open MPI). The install script of the 10.1.008 suite lists the supported platform. That includes kernel 2.6 and glibc 2.6. I guess there are some loose ends. -- Valmor > > > > On Dec 5, 2007, at 9:59 AM, de Almeida, Valmor F. wrote: > > > > > > > Attached is the config.log file for intel 9.1.052. I've also tried the > > intel 10.1.008 and posted to this list the config.log on a previous > > e-mail (12/2/2007). > > > > Here are the key commands for building and installing > > > > export FC=ifort > > export F77=ifort > > export CXX=icpc > > export CC=icc > > > > ./configure --prefix=/usr/local/packages/openmpi-1.2.4_intel-9.1.052 > > --with-mpi-param_check=always --with-mpi-f90-size=medium > > --with-f90-max-array-dim=4 CC=icc CXX=icpc F90=ifort F77=ifort > > > > make -j 2 > > make -j 2 install > > > > Here is some info on my system > > > > ->emerge --info > > Portage 2.1.3.19 (default-linux/x86/2007.0, gcc-4.1.2, glibc-2.6.1-r0, > > 2.6.22.9 i686) > > = > > System uname: 2.6.22.9 i686 Intel(R) Xeon(TM) CPU 2.66GHz > > Timestamp of tree: Sat, 17 Nov 2007 04:30:01 + > > app-shells/bash: 3.2_p17 > > dev-java/java-config: 1.3.7, 2.0.33-r1 > > dev-lang/python: 2.4.4-r6 > > dev-python/pycrypto: 2.0.1-r6 > > sys-apps/baselayout: 1.12.9-r2 > > sys-apps/sandbox:1.2.18.1-r2 > > sys-devel/autoconf: 2.13, 2.61-r1 > > sys-devel/automake: 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10 > > sys-devel/binutils: 2.18-r1 > > sys-devel/gcc-config: 1.3.16 > > sys-devel/libtool: 1.5.24 > > virtual/os-headers: 2.6.22-r2 > > > > Here is > > > > ->echo $PATH > > /opt/cubit:/opt/gambit/bin:/opt/compilers/intel/idb/9.1.052/bin:/opt/ > > com > > pilers/intel/fc/9.1.052/bin:/opt/compilers/intel/cc/9.1.052/bin:/usr/ > > loc > > al/nwchem/bin:/usr/local/visit/bin:/usr/local/ompi_intel/bin:/usr/ > > local/ > > sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/i686- > > pc- > > linux-gnu/gcc-bin/4.1.2:/usr/local/packages/cca- > > tools-0.6.4_gcc-4.1.2/bi > > n:/usr/bin:/opt/chpl/bin/linux > > > > Here is > > > > ->echo $LD_LIBRARY_PATH > > /opt/compilers/intel/fc/9.1.052/lib:/opt/compilers/intel/cc/9.1.052/ > > lib: > > /usr/local/ompi_intel/lib::/usr/local/packages/cca- > > tools-0.6.4_gcc-4.1.2 > > /lib > > > > > > I am also copying this to the person at Intel who is looking at the > > problem, and here is a posting from the Intel Premier Support (Issue > > number: 461117) for this case > > > > > > 12/04/2007 > > Valmor, > > Thanks for your submission. The Intel compilers have supported the 2.6 > > Linux kernel for some time now, but they do not yet support glibc 2.6. > > The most recent version of glibc supported is 2.5, as represented by > > the > > Red Hat Enterprise Linux 5 and Ubuntu 7.04 distributions. There are > > known issues with Ubuntu 7.10, for example, which has a later glibc. > > What version of Gentoo are you using, and do you have the option to > > try > > an older glibc and gcc along with the Intel compiler version 10.1? > > > > It's not sure that the glibc version is the problem, so I will try to > > build OpenMPI with glibc 2.5 on Red Hat EL5 or Ubuntu 7.04 to see if > > that shows any problems. > > > > Regards, > > Martyn > > > > 12/05/2007 > > Martyn, > > > > During the installation of 10.1.008, the install script says that > > glibc > > 2.6 is supported. > > > > -- > > Valmor > > > > > > Thanks for your help. > > > > -- > > Valmor > > > > > > > > > > > > > > > > > >> -Original Message- > >> From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] > > On > >> Behalf Of Jeff Squyres > >> Sent: Tuesday, December 04, 2007 5:58 PM > >> To: Open MPI Users > >> Subject: Re: [OMPI users] suggested intel compiler version for > > openmpi- > >> 1.2.4 > >> > >> I have compiled Open MPI with Int
Re: [OMPI users] suggested intel compiler version for openmpi-1.2.4
If Intel is telling you that they don't support your glibc version, I wouldn't be surprised by random segv's in any application that you build on that platform (including Open MPI). On Dec 5, 2007, at 9:59 AM, de Almeida, Valmor F. wrote: Attached is the config.log file for intel 9.1.052. I've also tried the intel 10.1.008 and posted to this list the config.log on a previous e-mail (12/2/2007). Here are the key commands for building and installing export FC=ifort export F77=ifort export CXX=icpc export CC=icc ./configure --prefix=/usr/local/packages/openmpi-1.2.4_intel-9.1.052 --with-mpi-param_check=always --with-mpi-f90-size=medium --with-f90-max-array-dim=4 CC=icc CXX=icpc F90=ifort F77=ifort make -j 2 make -j 2 install Here is some info on my system ->emerge --info Portage 2.1.3.19 (default-linux/x86/2007.0, gcc-4.1.2, glibc-2.6.1-r0, 2.6.22.9 i686) = System uname: 2.6.22.9 i686 Intel(R) Xeon(TM) CPU 2.66GHz Timestamp of tree: Sat, 17 Nov 2007 04:30:01 + app-shells/bash: 3.2_p17 dev-java/java-config: 1.3.7, 2.0.33-r1 dev-lang/python: 2.4.4-r6 dev-python/pycrypto: 2.0.1-r6 sys-apps/baselayout: 1.12.9-r2 sys-apps/sandbox:1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.61-r1 sys-devel/automake: 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10 sys-devel/binutils: 2.18-r1 sys-devel/gcc-config: 1.3.16 sys-devel/libtool: 1.5.24 virtual/os-headers: 2.6.22-r2 Here is ->echo $PATH /opt/cubit:/opt/gambit/bin:/opt/compilers/intel/idb/9.1.052/bin:/opt/ com pilers/intel/fc/9.1.052/bin:/opt/compilers/intel/cc/9.1.052/bin:/usr/ loc al/nwchem/bin:/usr/local/visit/bin:/usr/local/ompi_intel/bin:/usr/ local/ sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/i686- pc- linux-gnu/gcc-bin/4.1.2:/usr/local/packages/cca- tools-0.6.4_gcc-4.1.2/bi n:/usr/bin:/opt/chpl/bin/linux Here is ->echo $LD_LIBRARY_PATH /opt/compilers/intel/fc/9.1.052/lib:/opt/compilers/intel/cc/9.1.052/ lib: /usr/local/ompi_intel/lib::/usr/local/packages/cca- tools-0.6.4_gcc-4.1.2 /lib I am also copying this to the person at Intel who is looking at the problem, and here is a posting from the Intel Premier Support (Issue number: 461117) for this case 12/04/2007 Valmor, Thanks for your submission. The Intel compilers have supported the 2.6 Linux kernel for some time now, but they do not yet support glibc 2.6. The most recent version of glibc supported is 2.5, as represented by the Red Hat Enterprise Linux 5 and Ubuntu 7.04 distributions. There are known issues with Ubuntu 7.10, for example, which has a later glibc. What version of Gentoo are you using, and do you have the option to try an older glibc and gcc along with the Intel compiler version 10.1? It's not sure that the glibc version is the problem, so I will try to build OpenMPI with glibc 2.5 on Red Hat EL5 or Ubuntu 7.04 to see if that shows any problems. Regards, Martyn 12/05/2007 Martyn, During the installation of 10.1.008, the install script says that glibc 2.6 is supported. -- Valmor Thanks for your help. -- Valmor -Original Message- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of Jeff Squyres Sent: Tuesday, December 04, 2007 5:58 PM To: Open MPI Users Subject: Re: [OMPI users] suggested intel compiler version for openmpi- 1.2.4 I have compiled Open MPI with Intel 10.0 and 9.1 with no problems on RHEL4U4. Can you send all the info that you can (obviously, ompi_info won't run) from http://www.open-mpi.org/community/help/ ? On Dec 4, 2007, at 4:26 PM, de Almeida, Valmor F. wrote: Hello, What is the suggested intel compiler version to compile openmpi-1.2.4? I tried versions 10.1.008 and 9.1.052 and no luck in getting a working library. In both cases I get: ->mpic++ --showme Segmentation fault ->ompi_info Segmentation fault Thanks for your help. -- Valmor de Almeida ___ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres Cisco Systems ___ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users ___ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres Cisco Systems
Re: [OMPI users] suggested intel compiler version for openmpi-1.2.4
Attached is the config.log file for intel 9.1.052. I've also tried the intel 10.1.008 and posted to this list the config.log on a previous e-mail (12/2/2007). Here are the key commands for building and installing export FC=ifort export F77=ifort export CXX=icpc export CC=icc ./configure --prefix=/usr/local/packages/openmpi-1.2.4_intel-9.1.052 --with-mpi-param_check=always --with-mpi-f90-size=medium --with-f90-max-array-dim=4 CC=icc CXX=icpc F90=ifort F77=ifort make -j 2 make -j 2 install Here is some info on my system ->emerge --info Portage 2.1.3.19 (default-linux/x86/2007.0, gcc-4.1.2, glibc-2.6.1-r0, 2.6.22.9 i686) = System uname: 2.6.22.9 i686 Intel(R) Xeon(TM) CPU 2.66GHz Timestamp of tree: Sat, 17 Nov 2007 04:30:01 + app-shells/bash: 3.2_p17 dev-java/java-config: 1.3.7, 2.0.33-r1 dev-lang/python: 2.4.4-r6 dev-python/pycrypto: 2.0.1-r6 sys-apps/baselayout: 1.12.9-r2 sys-apps/sandbox:1.2.18.1-r2 sys-devel/autoconf: 2.13, 2.61-r1 sys-devel/automake: 1.5, 1.6.3, 1.7.9-r1, 1.8.5-r3, 1.9.6-r2, 1.10 sys-devel/binutils: 2.18-r1 sys-devel/gcc-config: 1.3.16 sys-devel/libtool: 1.5.24 virtual/os-headers: 2.6.22-r2 Here is ->echo $PATH /opt/cubit:/opt/gambit/bin:/opt/compilers/intel/idb/9.1.052/bin:/opt/com pilers/intel/fc/9.1.052/bin:/opt/compilers/intel/cc/9.1.052/bin:/usr/loc al/nwchem/bin:/usr/local/visit/bin:/usr/local/ompi_intel/bin:/usr/local/ sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/opt/bin:/usr/i686-pc- linux-gnu/gcc-bin/4.1.2:/usr/local/packages/cca-tools-0.6.4_gcc-4.1.2/bi n:/usr/bin:/opt/chpl/bin/linux Here is ->echo $LD_LIBRARY_PATH /opt/compilers/intel/fc/9.1.052/lib:/opt/compilers/intel/cc/9.1.052/lib: /usr/local/ompi_intel/lib::/usr/local/packages/cca-tools-0.6.4_gcc-4.1.2 /lib I am also copying this to the person at Intel who is looking at the problem, and here is a posting from the Intel Premier Support (Issue number: 461117) for this case 12/04/2007 Valmor, Thanks for your submission. The Intel compilers have supported the 2.6 Linux kernel for some time now, but they do not yet support glibc 2.6. The most recent version of glibc supported is 2.5, as represented by the Red Hat Enterprise Linux 5 and Ubuntu 7.04 distributions. There are known issues with Ubuntu 7.10, for example, which has a later glibc. What version of Gentoo are you using, and do you have the option to try an older glibc and gcc along with the Intel compiler version 10.1? It's not sure that the glibc version is the problem, so I will try to build OpenMPI with glibc 2.5 on Red Hat EL5 or Ubuntu 7.04 to see if that shows any problems. Regards, Martyn 12/05/2007 Martyn, During the installation of 10.1.008, the install script says that glibc 2.6 is supported. -- Valmor Thanks for your help. -- Valmor > -Original Message- > From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On > Behalf Of Jeff Squyres > Sent: Tuesday, December 04, 2007 5:58 PM > To: Open MPI Users > Subject: Re: [OMPI users] suggested intel compiler version for openmpi- > 1.2.4 > > I have compiled Open MPI with Intel 10.0 and 9.1 with no problems on > RHEL4U4. > > Can you send all the info that you can (obviously, ompi_info won't > run) from http://www.open-mpi.org/community/help/ ? > > > > On Dec 4, 2007, at 4:26 PM, de Almeida, Valmor F. wrote: > > > > > Hello, > > > > What is the suggested intel compiler version to compile openmpi-1.2.4? > > > > I tried versions 10.1.008 and 9.1.052 and no luck in getting a working > > library. In both cases I get: > > > > ->mpic++ --showme > > Segmentation fault > > > > ->ompi_info > > Segmentation fault > > > > Thanks for your help. > > > > -- > > Valmor de Almeida > > > > > > > > > > > > ___ > > users mailing list > > us...@open-mpi.org > > http://www.open-mpi.org/mailman/listinfo.cgi/users > > > -- > Jeff Squyres > Cisco Systems > ___ > users mailing list > us...@open-mpi.org > http://www.open-mpi.org/mailman/listinfo.cgi/users config.log.bz2 Description: config.log.bz2
Re: [OMPI users] suggested intel compiler version for openmpi-1.2.4
I have compiled Open MPI with Intel 10.0 and 9.1 with no problems on RHEL4U4. Can you send all the info that you can (obviously, ompi_info won't run) from http://www.open-mpi.org/community/help/ ? On Dec 4, 2007, at 4:26 PM, de Almeida, Valmor F. wrote: Hello, What is the suggested intel compiler version to compile openmpi-1.2.4? I tried versions 10.1.008 and 9.1.052 and no luck in getting a working library. In both cases I get: ->mpic++ --showme Segmentation fault ->ompi_info Segmentation fault Thanks for your help. -- Valmor de Almeida ___ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users -- Jeff Squyres Cisco Systems
[OMPI users] suggested intel compiler version for openmpi-1.2.4
Hello, What is the suggested intel compiler version to compile openmpi-1.2.4? I tried versions 10.1.008 and 9.1.052 and no luck in getting a working library. In both cases I get: ->mpic++ --showme Segmentation fault ->ompi_info Segmentation fault Thanks for your help. -- Valmor de Almeida
