Re: [Pw_forum] Electric field in silicene

2015-01-12 Thread Lorenzo Paulatto
On 10/01/15 18:41, siham Sadki wrote: > K_POINTS {automatic} > 10 10 1 1 1 1 Dear Siham, using a k-point grid shifted along the Z direction is wrong for 2D materials, it is also probably wrong for applying dipfield. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Univer

Re: [Pw_forum] cluster

2015-01-10 Thread Lorenzo Paulatto
n parallel. If you are using the pre-packed version of mpich that comes with some linux distributions you have to install the development version of the package. In any case, I *strongly* recommend that you seek the help of some local linux expert (i.e. anybody with some exprience will do). kind

Re: [Pw_forum] Issue with PAW-BLYP pseudopots and spin-polarized calculations.

2014-11-27 Thread Lorenzo Paulatto
; >> > > >> > > >> > > Thanks! >> > > >> > > >> > > Dr. G. A. Bocan >> > >> > >

Re: [Pw_forum] LO-TO splitting in complete phonon dispersion using PWSCF

2014-11-21 Thread Lorenzo Paulatto
compare with the q-point to decide if a mode is L or T. cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Université Paris 6 phone: +33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4é16 Boîte courrier 115, 4 place Jussieu 75252 Paris Cédex 05 _

Re: [Pw_forum] LO-TO splitting in complete phonon dispersion using PWSCF

2014-11-21 Thread Lorenzo Paulatto
the long range LO-TO splitting kicks in. > > Also, I want to know the details (or please refer any source or > tutorial) and difference of *"fleig"* and *"fldyn". *Surprisingly I was > not able to find any frequencies in fidyn out put file. My out put is as > f

Re: [Pw_forum] LO-TO splitting in complete phonon dispersion using PWSCF

2014-11-21 Thread Lorenzo Paulatto
0.00 0.00 0.00 0.143430 0.00 ) > ****** > > *AB2.freq* > > &plot nbnd= 9, nks= 1 / > 0.50 0.50 0.50 > 43.9819 55.4437 71.3830 92.18

Re: [Pw_forum] LO-TO splitting in complete phonon dispersion using PWSCF

2014-11-20 Thread Lorenzo Paulatto
is neither. You can then associated the frequency with the label. HTH On 20/11/14 15:43, Kondaiah Samudrala wrote: > Dear Dr. Lorenzo Paulatto > > > Thank you for the conformation.. How can I distinguish the both modes.. i.e > whether LO or TO. Because, in the phonon dispersi

Re: [Pw_forum] LO-TO splitting in complete phonon dispersion using PWSCF

2014-11-20 Thread Lorenzo Paulatto
The phonon dispersion will automatically include LO-TO splitting, if effective charges are found in the force constants file. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Université Paris 6 phone: +33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paul

Re: [Pw_forum] manypw.x

2014-11-18 Thread Lorenzo Paulatto
On 17/11/14 23:37, Youssef Aharbil wrote: > Dear Quantum espresso, > > What's the utility of the new program manypw.x?, I got a look in > manypw.f90 but didn't find lot of explanation. > To run several different input files of pw.x with a single MPI instance kind

Re: [Pw_forum] difference in output from dynmat.x and matdyn.x

2014-11-16 Thread Lorenzo Paulatto
scf.org> http://pwscf.org/mailman/listinfo/pw_forum ___ Pw_forum mailing list Pw_forum@pwscf.org http://pwscf.org/mailman/listinfo/pw_forum -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Université Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24

Re: [Pw_forum] IFCs and supercell

2014-11-07 Thread Lorenzo Paulatto
inside the first unit cell (which is a trivial operation in crystal coordinates) before doing this operation. However, I have yet to see somebody do that and it adds annoying phase factors in a code that's already complicated enough. cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS &

Re: [Pw_forum] Plotting HOMO, LUMO wavefunction

2014-11-01 Thread Lorenzo Paulatto
um-espresso.org/wp-content/uploads/Doc/INPUT_PP.html#idp42384> kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Université Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4é16 Boîte courr

Re: [Pw_forum] Quantum Espresso Installation Error Message - Undefined reference.

2014-10-28 Thread Lorenzo Paulatto
_mpi_float' Thanks & Regards JaiKumar S HPC -Engineer, HCL Infosystems Ltd, PH : 09751855415 Email:jaikuma...@hcl.com <https://webmail.hclinsys.com/src/compose.php?send_to=jaikumar.s%40hcl.com> Technology that touches lives ___ Pw_forum mai

Re: [Pw_forum] nqx=1 in input but full grid in output

2014-10-21 Thread Lorenzo Paulatto
scales with the square of the number of k-points. By setting nqX to a fixed value the scaling becomes linear again when nk is bigger than nq. -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Université Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www.impmc.upmc.fr/~paulatto/ 23-24/

Re: [Pw_forum] Convergence of Magnetization in Graphene Monovacancy Supercell

2014-10-21 Thread Lorenzo Paulatto
t electrons in the vacuum. About 6 or 7 Angstroms of vacuum is enough. best regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Université Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www.impmc.upmc.fr/~paulatto/ 23-24/4é16 Boîte courrier 115, 4 place

[Pw_forum] MD calculations result in errors due to ions

2014-10-06 Thread Lorenzo Paulatto
On 10/06/2014 08:39 PM, Nicola Marzari wrote: > you didn't close the namelist ions with a / at the end. > also, not sure the ! are read correctly, they are everything after ! is a comment -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 /

[Pw_forum] Interpretation of the electron phonon results.

2014-10-06 Thread Lorenzo Paulatto
these numbers. Your help is highly > appreciated. > > > Thanks in advance > > Elio > University of Rondonio > Brazil > > > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/

[Pw_forum] ignoring the antiferromagnetic order in the symmetry analysis of phonons

2014-09-30 Thread Lorenzo Paulatto
rantee that it makes sense, but it may be enough for your application. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 0

[Pw_forum] Phonons calcultation at Gamma

2014-09-23 Thread Lorenzo Paulatto
; > with respectful regards > Said Asma > > *** > Said Asma, > PhD. LMCN, > Facult? des sciences de Monastir, > Avenue de l'environnement 5019-Monastir,Tunisie > E-mail :saidasma1987 at yahoo.fr >

[Pw_forum] Error in routine bfgs (1): dE0s is positive which should never happen

2014-09-22 Thread Lorenzo Paulatto
__ >> Pw_forum mailing list >> Pw_forum at pwscf.org >> http://pwscf.org/mailman/listinfo/pw_forum -- Lorenzo Paulatto - Paris 18 -- next part -- An HTML attachment was scrubbed... URL: http://pwscf.org/pipermail/pw_forum/attachments/20140922/23552dad/attachment.html

[Pw_forum] QE 5.1: "error in DGETRF" restarting vc-relax calculation

2014-09-08 Thread Lorenzo Paulatto
ems in QE 5.0.3. > > As far as I can understand, the error occurs in > CALL invmat (3, rot, overlap, value) > (sym_base.f90, line 240) since all elements of the rot(3,3) array are zero. > > > Help please... > Thank you in advance. > -- Dr. Lorenzo Paulatto IdR @

[Pw_forum] regarding 'nscf' calculation

2014-09-03 Thread Lorenzo Paulatto
le. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05

[Pw_forum] error in optic properties

2014-08-08 Thread Lorenzo Paulatto
Dear Fataneh, You asked the same question the 29th of July and I already answered you once. Did you read my answer? Kind regards Lorenzo Paulatto - Paris On 5 Aug 2014 08:10, "fataneh bostan afroz" wrote: > Dear > I want to calculate optic properties of ZnO bulk using quantum

[Pw_forum] question on the naming method of atomic species.

2014-08-04 Thread Lorenzo Paulatto
witch Ni to C, the error dissappear. > My question is, how can I make this work if I need to name this way? > Thanks for any suggestion. > Best wishes > > > > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://p

[Pw_forum] Regarding LA_TA modes

2014-07-30 Thread Lorenzo Paulatto
On 07/30/2014 04:43 PM, Kondaiah Samudrala wrote: > Respected Dr. Lorenzo Paulatto, > Thank you for Quick reply..May be it is basic and crude to ask like this.can > you please explain me the*"**displacement pattern of the atoms"* in pwscf > output.. I am not clear..Ot

[Pw_forum] Regarding LA_TA modes

2014-07-30 Thread Lorenzo Paulatto
thogonal the mode is transverse. When a special q point has a symmetry equivalent copy that is orthogonal to itself, TA and LA will be degenerate, I'm not sure this is the only case when this can happen. bests -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)

[Pw_forum] error in optic properties

2014-07-30 Thread Lorenzo Paulatto
4 12:00 PM, ashkan shekaari wrote: > i had this kind of error > > it does gonna help you > > try it > > On 7/30/14, Lorenzo Paulatto wrote: >> On 07/30/2014 11:07 AM, ashkan shekaari wrote: >>> in the files scf.in and nscf.in always use wf_collect=.true.i

[Pw_forum] error in optic properties

2014-07-30 Thread Lorenzo Paulatto
vice, I understand your good willingness but performing a DFT calculation is not like photo retouching, where you just tweak random parameters until it looks good. kind regards. -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www.i

[Pw_forum] error in optic properties

2014-07-30 Thread Lorenzo Paulatto
t pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next part --

[Pw_forum] error in optic properties

2014-07-30 Thread Lorenzo Paulatto
Ry > I'm curious where did you get these numbers from? Using less than 4 times the cutoff of kinetic energy for charge density is not something that should be done without careful testing. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +3

[Pw_forum] IS DUAL CORE 2.7 GHz, 2GB RAM SUFFICIENT FOR QE calculations??

2014-07-23 Thread Lorenzo Paulatto
es. With the same money you can probably grab special offer desktop from Dell with only 4 cores, but each 4 times faster. cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courr

[Pw_forum] D3 code (from the PHonon package) output

2014-07-22 Thread Lorenzo Paulatto
) ) fac = vloc (igtongl (ng), ityp (na) ) * tpiba**3 * omega *exp ((0.d0,1.d0)*gtau) d3vloc (nl(ng),na_i, na_j, na_k) = fac * g (icart, ng) * g (jcart, ng) * g (kcart, ng) enddo CALL invfft ('Dense', d3vloc, dfftp) enddo enddo enddo cheers -- D

[Pw_forum] D3 code (from the PHonon package) output

2014-07-21 Thread Lorenzo Paulatto
0240 China > M:germaneau at sjtu.edu.cn P:+86-136-4161-6480 W:http://hpc.sjtu.edu.cn > > > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275

[Pw_forum] FW: The corresponding WZ mode of the Phonons frequencies obtained???

2014-07-21 Thread Lorenzo Paulatto
Dear Benyahia, phonon should have produced a dynamical matrix file which also includes the displacement patters. You can compare thos with what is reported in literature to give assign the correct names. It is a long and boring job, but it gets easier with practice. bests -- Dr. Lorenzo

[Pw_forum] PW.X WORKS ONCE AND NEXT TIME DOESN'T.. FOR THE SAME INPUT FILE..

2014-07-15 Thread Lorenzo Paulatto
On 07/15/2014 10:15 AM, Giovanni Cantele wrote: > the shell script is not able to make mathematical operations, so if > you write > ecutrho=$ecut*8 Actually, the bash shell can do some integer arithmetic. This would work: ecutrho = $[$ecut*8] hth -- Dr. Lorenzo Paulatto Id

[Pw_forum] pw.x memory usage

2014-07-08 Thread Lorenzo Paulatto
quot;dithiol between gold leads" sounds like a 2D or even 1D system, are you sure your choice of k-points is consistent? regards > -- > Dr. Lorenzo Paulatto > IdR @ IMPMC -- CNRS & Universit? Paris 6 > +33 (0)1 44 275 084 / skype: paulatz > http://www-int.impmc.upmc.fr/~

[Pw_forum] etot_conv_thr and forc_conv_thr unit

2014-06-25 Thread Lorenzo Paulatto
On 06/25/2014 03:10 PM, toufik esssakhri wrote: > a.u for the forc_conv_thr means Ry/bohr**3 and for etot_conv_thr is Ry?? Ry/bohr, not Ry/bohr^3: it's a force. > > i want just to check is this true or not. > it is -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit

[Pw_forum] problem with vc-relax

2014-06-24 Thread Lorenzo Paulatto
output file. > > Please help me overcome this problem. > > Thanks in advance > > > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum -- Dr. Lorenzo Paulatto IdR @ IMPMC

[Pw_forum] hi

2014-06-18 Thread Lorenzo Paulatto
ut is: > > Z* not found in file CuSbS2-dyn.fc, TO-LO splitting at q=0 will be absent! > > please help me > thanks > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum > -- Dr.

[Pw_forum] QE v5.1 problem with projwfc.x when using rVV10 functional

2014-06-06 Thread Lorenzo Paulatto
dir, not in pseudodir. Can you make a copy of the table in $outdir/$prefix.save (there should already be copies of the pseudos there) and retrry? kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~

[Pw_forum] Hybrid calculation stop!!

2014-05-30 Thread Lorenzo Paulatto
memory, do you have plenty of it? regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next part --

[Pw_forum] Fwd: NaN in plotbands.x

2014-05-19 Thread Lorenzo Paulatto
> Vardha. > > > > Dept. of Chemistry > IISER Bhopal, > India. > > > > > > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum -- Dr. Lorenzo Paula

[Pw_forum] UPF version 1 pseudopotentials

2014-05-13 Thread Lorenzo Paulatto
delle Scienze 208, 33100 Udine, Italy > Phone +39-0432-558216, fax +39-0432-558222 > > ___ > Pw_forum mailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum > >

[Pw_forum] binding energy of molecular oxygen

2014-04-28 Thread Lorenzo Paulatto
O.pbe-rrkjus.UPF > > ATOMIC_POSITIONS crystal > > O 0.217969593 0.389882242 0.401960243 > > K_POINTS automatic > > 5 5 2 0 0 0 > Sorry, I only just noticed the K_POINT... why are you using anything different from Gamma? This is supposed to be an isolated syst

[Pw_forum] binding energy of molecular oxygen

2014-04-28 Thread Lorenzo Paulatto
d molecular > > Wuhan University > > Wuhan, China > > Email: cjxxjc729 at gmail.com <mailto:cjxxjc729 at gmail.com> > > ------- > > Junxiang Chen > > Ph.D. candidate > > Department of chemistry a

[Pw_forum] Fwd: copper norm-conserving pseudopotential

2014-04-24 Thread Lorenzo Paulatto
On 04/24/2014 04:25 PM, Amin Torabi wrote: > Lorenzo, > > Any idea where I can get one? > I think there are a couple here: <http://www.quantum-espresso.org/pseudo-search-results/?el_id=29&unp_id=7&fun_id&colum_k&origin_id> cheers > -- > Dr. Lorenzo Pa

[Pw_forum] Fwd: copper norm-conserving pseudopotential

2014-04-24 Thread Lorenzo Paulatto
ailing list > Pw_forum at pwscf.org > http://pwscf.org/mailman/listinfo/pw_forum > > -- > Dr. Lorenzo Paulatto > IdR @ IMPMC -- CNRS & Universit? Paris 6 > +33 (0)1 44 275 084 / skype: paulatz > http://www-int.impmc.upmc.fr/~paulatto/ > 23-24/4?16 Bo?te courrier 115, 4 plac

[Pw_forum] Problem starting a phonon calculation (phq_readin (17))

2014-04-24 Thread Lorenzo Paulatto
you need to close the namelist with a "/" -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05

[Pw_forum] problems with running Quantum Espresso in parallel

2014-04-22 Thread Lorenzo Paulatto
inp >>> mpirun -np 16 pw.x < input.inp >>> >>> In the archives of this mailing list I have seen some similar >>> problems, >>> but in spite of this I was still not able to solve my problem. >>> >>> I would appreciate very much if

[Pw_forum] QE interface with LIBXC

2014-04-22 Thread Lorenzo Paulatto
xtremely likely that it supports the functional you need. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05

[Pw_forum] Thermo

2014-04-15 Thread Lorenzo Paulatto
ssh qeforge.qe-forge.org what happens? > -- > Dr. Lorenzo Paulatto > IdR @ IMPMC -- CNRS & Universit? Paris 6 > +33 (0)1 44 275 084 / skype: paulatz > http://www-int.impmc.upmc.fr/~paulatto/ > 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- n

[Pw_forum] Pw_forum Digest, Vol 81, Issue 13

2014-04-13 Thread Lorenzo Paulatto
ORE THE BELOW CLEANUP MESSAGES > = > APPLICATION TERMINATED WITH THE EXIT STRING: Killed (signal 9) > This is a message from your queue system, whatever caused the program to stop happened before bes

[Pw_forum] Hybrid functional q-point convergence error

2014-04-12 Thread Lorenzo Paulatto
e completion of self consistent calculation saying: nq must be a divisor of nk in the same direction, in particular nq3 must always be one in your case lp -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~p

[Pw_forum] error when running GRIR443

2014-04-09 Thread Lorenzo Paulatto
On 04/09/2014 05:04 PM, ??? wrote: > when running GRIR443, there is an error: Does directory "./grir443" exist? If yes, try cleaning it/deleting it. If no, can you create it? best regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084

[Pw_forum] question about correctness

2014-04-08 Thread Lorenzo Paulatto
at it says after 2 iter ,convergence > NOT ACHIEVED > then i am wondering since convergence not achieved, how can i > guarantee its correctness? > Dear ???, you cannot. If you want a correct result you must converge it. best regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS &

[Pw_forum] QE v.5.0.2: the openmpi parallel problem

2014-04-03 Thread Lorenzo Paulatto
! > It does have a parallel version, but did you compile it correctly? Please send us your make.sys file (rename it to something else, as .sys files are often blocked) so we can double-check this. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1

[Pw_forum] QE pw-gpu help

2014-03-20 Thread Lorenzo Paulatto
ging. Try without pot and wfc extrapolations, those are supposed to be used for dynamics and are not guaranteed to work for BFGS optimization. > -- > Dr. Lorenzo Paulatto > IdR @ IMPMC -- CNRS & Universit? Paris 6 > +33 (0)1 44 275 084 / skype: paulatz > http://www-int.impmc.u

[Pw_forum] QE pw-gpu help

2014-03-20 Thread Lorenzo Paulatto
On 03/20/2014 10:22 AM, ??? wrote: > > it seems that the parameter > etot_conv_thr = 1.0E-5 , > forc_conv_thr = 1.0D-4 > take charge of its ending?right? help~ > yes, it does

[Pw_forum] Fw: Fermi Energy

2014-03-13 Thread Lorenzo Paulatto
he one from nscf: it is not computed correctly (this is fixed in the development version of pw.x) > -- > Dr. Lorenzo Paulatto > IdR @ IMPMC -- CNRS & Universit? Paris 6 > +33 (0)1 44 275 084 / skype: paulatz > http://www-int.impmc.upmc.fr/~paulatto/ > 23-24/4?16 Bo?te c

[Pw_forum] Constrained magnetic calculation

2014-03-03 Thread Lorenzo Paulatto
uot;tot_magnetization", you should not specify starting_magnetization. +---- kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te c

[Pw_forum] pseudopotential

2014-02-26 Thread Lorenzo Paulatto
On 02/26/2014 08:20 AM, raha khalili wrote: > No idea??!! > If somebody knows every answer it's not scientific research. Take a sample structure and try both cases, check how much difference it makes, decide. good work -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit?

[Pw_forum] igk files

2014-02-21 Thread Lorenzo Paulatto
en just afterward in hinit0.f90 (and in many otehr palces in other codes) HTH cheers > Thanks a lot. > -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 pla

[Pw_forum] dist.x giving NaN values for angles

2014-02-20 Thread Lorenzo Paulatto
porting -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 5

[Pw_forum] need help

2014-02-20 Thread Lorenzo Paulatto
ery close to the experimentalone . that we can > consider as the correct value or it must be identical ?? > how we can explain this diffrence?? > mayeb the gap is indirect -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz htt

[Pw_forum] ask for a tsmd code

2014-02-07 Thread Lorenzo Paulatto
e qe-forge.org website, apparently it is developed by Luigi Giacomazzi. http://qe-forge.org/gf/project/tsmd/ Just ask him directly. best regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulat

[Pw_forum] different PP gives different result, why???

2014-02-05 Thread Lorenzo Paulatto
On 02/05/2014 11:18 AM, Lorenzo Paulatto wrote: > On 02/05/2014 10:56 AM, Ganjar Kurniawan wrote: >> I am trying to compare the calculation of the Lithium bulk system >> which has BCC structure with lattice constant is 6.597 bohr using >> different pseudopotential betwee

[Pw_forum] different PP gives different result, why???

2014-02-05 Thread Lorenzo Paulatto
energy of your crystal. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next part -- An H

[Pw_forum] Reg: Is QE completely dependent on system parameters?

2014-02-05 Thread Lorenzo Paulatto
ou are trying to perform. kind regards. > -- > Dr. Lorenzo Paulatto > IdR @ IMPMC -- CNRS & Universit? Paris 6 > +33 (0)1 44 275 084 / skype: paulatz > http://www-int.impmc.upmc.fr/~paulatto/ > 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 --

[Pw_forum] number of kpoints for lambda.x

2014-02-03 Thread Lorenzo Paulatto
On 02/03/2014 03:58 PM, yelena wrote: > elph. 0.33.-0.192450. 0.00 Maybe the code does not like that number are attached to each other, like here. But to be honest, I don't know: I'm not familiar with the elph code. good work > > -- > Dr. Lorenzo Paulatto

[Pw_forum] number of kpoints for lambda.x

2014-01-31 Thread Lorenzo Paulatto
et 43 q > points and when I do kpoints.x for 12 12 1 I get 19 points. I'm having > hexagonal structure with 7 atoms. What can I do? > Dear Yelena, the electron phonon calculation may be using both the k and k+q points, eventually with different symmerty. They are not necessary the same pro

[Pw_forum] uniform grid

2014-01-26 Thread Lorenzo Paulatto
ke.sys file etc. 2. what you where trying to do and what you were expecting to get 3. what you actually go and why do you think it is different from what you were expecting I also helps a lot to ask a question to the right people: this is not a Yambo mailing list. best regards -- Dr. L

[Pw_forum] How to set Occupation to Calculate Grapgene DOS?

2014-01-24 Thread Lorenzo Paulatto
2x32x1 k-points for an accurate calculation in graphene. p.s. what is Grapgene? -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 5

[Pw_forum] Undefined reference to gfortran

2014-01-24 Thread Lorenzo Paulatto
On 01/24/2014 05:57 PM, BENYAHIA NEZHA wrote: > band-3c.for Dear Nezha, There is no such file in the Quantum-ESPRESSO distribution. I would recommend you ask whomever provided it to you. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44

[Pw_forum] How to set Occupation to Calculate Grapgene DOS?

2014-01-24 Thread Lorenzo Paulatto
rong: the DOS will be computed with the k-points used for the bands. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05

[Pw_forum] Question on SCF

2014-01-23 Thread Lorenzo Paulatto
orithm?). I would try to remove all of the more advanced parameters and leave only the essential. Finally, remember to always attach the output of a calculation, especially when it is so heavy to reproduce. -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1

[Pw_forum] problem in determine cell_factor

2014-01-16 Thread Lorenzo Paulatto
espresso report cell parameter in alat unit & I could not > convert alart unit to angstrom. alat itself is measured in bohr units, just multiply it by 0.52917721092 to get it in ?ngstrom Then multiply the axes vectors by this quantity to get the cell in ?ngstrom... -- Dr. Lorenzo Paula

[Pw_forum] dynamical matrix units

2014-01-15 Thread Lorenzo Paulatto
rico, you should tell us exactly what you've done if you want us to find what you did wrong. Did you take the square root of the eigenvalues? 0.0625 can be many things other than 2pi/100... best regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 442

[Pw_forum] problem in determine cell_factor

2014-01-15 Thread Lorenzo Paulatto
tom of carbon Are you sure that doing a variable cell relax calculation of a 2D supercell is a good idea? You should at the very least block the relaxing of the out-of-plane axis. best regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: p

[Pw_forum] Error in converting CIF to QE by "cif2qe.sh"

2014-01-08 Thread Lorenzo Paulatto
ree Software Foundation. ... -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next part -- A non-text attachm

[Pw_forum] Error in converting CIF to QE by "cif2qe.sh"

2014-01-07 Thread Lorenzo Paulatto
0.000 0.0000001 8.680891628420765 0.000 0.000 0.000 5.590036668211679 -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paula

[Pw_forum] Error in converting CIF to QE by "cif2qe.sh"

2014-01-07 Thread Lorenzo Paulatto
0.000 0.0000001 8.680891628420765 0.000 0.000 0.000 5.590036668211679 -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paula

[Pw_forum] Reg: Tc value for particular degauss values

2014-01-04 Thread Lorenzo Paulatto
to be honest I'm not sure they're implemented in every version of QE or only in the SVN one. Which version are you using, and which error message do you get? cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz ww

[Pw_forum] Reg: Tc value for particular degauss values

2014-01-03 Thread Lorenzo Paulatto
Which means 50 values of smearing from 0.01Ry to 50*0.01 Ry = 0.5 Ry cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 5

[Pw_forum] How to change the electronic field direction

2013-12-22 Thread Lorenzo Paulatto
On 12/22/2013 02:49 AM, Cao TF wrote:direction and the shape are > determined by edir, emaxpos, eopreg and eamp. but I still do not know > how to change the direction of the electronic field? If I remember correctly, eamp can be less than zero. cheers -- Dr. Lorenzo Paulatto IdR @

[Pw_forum] Order of Total Energy in SCF calculations

2013-12-21 Thread Lorenzo Paulatto
cientific & Technical Terms, 6E, Copyright ? 2003 by The McGraw-Hill Companies, Inc. -- -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te courrier 115, 4 place Juss

[Pw_forum] Order of Total Energy in SCF calculations

2013-12-20 Thread Lorenzo Paulatto
numbers. This won't make a difference unless you compute phonons or simulate molecular dynamics cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 5

[Pw_forum] equivalent atomic symbols are not found

2013-12-15 Thread Lorenzo Paulatto
ks, Alex > >From my modest experience with the QHA package it is not difficult to make it work. But forget about using the pre-built scripts: open them with a text editor and execute every step by hand. If you know a minimum about linux bash script, it takes one afternoon the first time

[Pw_forum] How to obtain partial phonon DOS

2013-12-05 Thread Lorenzo Paulatto
achieving this? you can use the projwfc.x code. It runs more or less liek the dos.x code, additional documentation is in PP/Doc bests -- -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo

[Pw_forum] DOS of graphene

2013-12-04 Thread Lorenzo Paulatto
t in order to Have E_Fermi=0, but it is nto automatic. cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next

[Pw_forum] DOS of graphene

2013-12-04 Thread Lorenzo Paulatto
t in order to Have E_Fermi=0, but it is nto automatic. cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next

[Pw_forum] How to distinguish phonon modes?

2013-12-02 Thread Lorenzo Paulatto
or other materials. I hope this helps. -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05 -- next part --

[Pw_forum] quantum espresso on cluster

2013-11-29 Thread Lorenzo Paulatto
On 11/29/2013 03:47 PM, yelena wrote: > Hello! > I've been trying to install qe on a cluster but I've been getting same > error all over again. which version? -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http:

[Pw_forum] not converge after 100 itration

2013-11-25 Thread Lorenzo Paulatto
. 93, 185503 (2004) -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 5

[Pw_forum] Forces are not zero (for atoms in non-primitive cell)

2013-11-20 Thread Lorenzo Paulatto
Using high verbosity you can have the different components of the forces printed on output: can you report which are not equal? -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz www: http://www-int.impmc.upmc.fr/~paulatto/ mail: 23-

[Pw_forum] Forces are not zero (for atoms in non-primitive cell)

2013-11-20 Thread Lorenzo Paulatto
case enforce it manually. You will also have to use 5x5x5 k-points, keeping in mind that if the grid was shifted it may be impossible to have exact equivalence. good work -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impm

[Pw_forum] k grid points in the calculations of electron-phonon interaction coefficients

2013-11-17 Thread Lorenzo Paulatto
ient that the q point is one of the k points and that the k point grid is centered around Gamma. In more general terms, the q grid must be a subset of the k grid. I.e. if your q grid is composed by n1 x n2 x n3 points the k-point grid can be (n1*m1) x (n2*m2) x (n3*m3) where everything is integer.

[Pw_forum] how to get one-electron kinetic energy for each orbit

2013-11-16 Thread Lorenzo Paulatto
ell you that there are many special cases to keep into account (gamma only, ultrasoft, etc). My code is actually still missing some piece and it's stored in my computer at work. If you are interested I'll send it to you on Monday with some comments. bests -- Dr. Lorenzo Paulatto IdR

[Pw_forum] sequential execution error with bands and dos

2013-11-12 Thread Lorenzo Paulatto
, i.e. it lack a single line with a "/", at the end of the file like this: &bands ... / Hence the code cannnot finish to read the namelist and complaints. kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 084 / skype: paulatz

[Pw_forum] sequential execution error with bands and dos

2013-11-12 Thread Lorenzo Paulatto
On 11/12/2013 10:10 PM, Ning Shen wrote: > namelist &inputpp no longer valid: please use &bands instead just do as it says: replace &inputp with &bands in the input file kind regards -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 phone:+33 (0)1 44275 0

[Pw_forum] Operating system error: Cannot allocate memory

2013-11-07 Thread Lorenzo Paulatto
riable. Finally make clean && make pw cheers -- Dr. Lorenzo Paulatto IdR @ IMPMC -- CNRS & Universit? Paris 6 +33 (0)1 44 275 084 / skype: paulatz http://www-int.impmc.upmc.fr/~paulatto/ 23-24/4?16 Bo?te courrier 115, 4 place Jussieu 75252 Paris C?dex 05

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