[QE-users] Plotting of spin resolved wave functions

2020-11-19 Thread Ankit Sirohi
Dear QE users, I want to plot the wave functions of spin-up and spin-down valence band maxima and conduction band minima in doped silicon nanoribbon. As has been plotted in Figure 2.c in the published work "Multi-functional spintronic devices based on boron- or aluminum-doped silicene

Re: [QE-users] QE_6.6 make error with hdf5

2020-11-19 Thread Ye Luo
Make sure your hdf5 is compiled with the same compiler as what you are using for QE and the compiled library has Fortran support enabled. Ye === Ye Luo, Ph.D. Computational Science Division & Leadership Computing Facility Argonne National Laboratory On Thu, Nov 19, 2020 at 8:52

[QE-users] Phonon disperison calculations with nat_todo

2020-11-19 Thread Jibiao Li
Dear All, Is it possible to do phonon dispersion calculations with nat_todo option? I am only interested in adlayers adsorbed on a metal surface. May I do this with QE? Sinerely Dr. Jibiao Li, Department of Material Science and Engineering Yangtze Normal University Juxian Dadao 16#,

[QE-users] QE_6.6 make error with hdf5

2020-11-19 Thread rekha sharma
Dear Sir This is in connection to my previous email. QE version 6.6 recognises the hdf5 library but when i try to execute make, I get below errors The system is redhat cluster. mpiifort -O2 -assume byterecl -g -traceback -nomodule -fpp -D__DFTI -D__MPI -D__SCALAPACK -Duse_beef -D__HDF5

Re: [QE-users] QE-6.5 with hdf5 library

2020-11-19 Thread rekha sharma
This is in addition to my previous mail. QE-6.6 is recognising hdf5 lib but qe-6.5 does not. On Fri, Nov 20, 2020 at 11:06 AM rekha sharma wrote: > Dear Sir > I have recompiled the hdf5 with --enable-fortran > the bin dir is having h5cc and when I execute"h5cc -show myprog.c", it > prints > >

Re: [QE-users] QE-6.5 with hdf5 library

2020-11-19 Thread rekha sharma
Dear Sir I have recompiled the hdf5 with --enable-fortran the bin dir is having h5cc and when I execute"h5cc -show myprog.c", it prints mpiicc myprog.c -L/home/rekha/soft/hdf5/lib /home/rekha/soft/hdf5/lib/libhdf5_hl.a /home/rekha/soft/hdf5/lib/libhdf5.a -lz -ldl -lm -Wl,-rpath

Re: [QE-users] Phonon: negative frequencies for adsorbate molecule using "nat-todo" option

2020-11-19 Thread Tamas Karpati
Dear Omer, Sorry, I'm not familiar with the EMT calculator, please consult the ASE or the EMT forum. Just a hint: the Python World is undergoing greater earthquakes, watch out for Python, ASE etc... versions (you need to match all). As for your theoretical problem to solve, I believe that you

Re: [QE-users] error compile gipaw

2020-11-19 Thread Davide Ceresoli
Dear Sangho, you can try now. But before doing make gipaw, do rm -Rf GIPAW/ rm install/6.6.tar.gz and change line 14 of install/plugins_list from: RELEASE_VERSION := $(shell awk -F\' '/version_number/{print $$2}' ../Modules/version.f90 ) to: RELEASE_VERSION := $(shell awk -F\'

Re: [QE-users] wrong offset

2020-11-19 Thread José Carlos Conesa Cegarra
Thanks for the indication. Would any pseudo of the ONCV_PBE collection give the same result? Would any norm-conserving pseudo behave in the same way? all hte best, José C. Conesa El 19/11/2020 a las 10:21, Paolo Giannozzi escribió: On Thu, Nov 19, 2020 at 10:12 AM José C. Conesa

Re: [QE-users] Understanding Output of atomic_proj.xml

2020-11-19 Thread Paolo Giannozzi
Projwfc.x computes "the projection of band states over atomic orbitals". If you just need atomic orbitals, it's not what you need Paolo On Wed, Nov 18, 2020 at 10:15 AM Didarul Alam wrote: > Hi Everyone > > For one of my projects, I need to calculate atomic wavefunction. For that, > I have

Re: [QE-users] error compile gipaw

2020-11-19 Thread Davide Ceresoli
I'm porting qe-gipaw to qe-6.6. I'm almost done. Later in the afternoon I will commit the chnages. D. On 11/18/20 5:04 PM, Sangho Chung wrote: Do you mean that installing QE v.6.5 will help to resolve this issue? Regards, Sangho ___ Quantum

Re: [QE-users] wrong offset

2020-11-19 Thread Paolo Giannozzi
On Thu, Nov 19, 2020 at 10:12 AM José C. Conesa wrote: > Error in routine offset_atom_wfc (1): > wrong offset > Which may be the reason? > V_ONCV_PBE_FR-1.9.UPF contains no atomic wavefunctions Paolo -- Paolo Giannozzi, Dip. Scienze Matematiche Informatiche e Fisiche, Univ.

Re: [QE-users] wrong offset

2020-11-19 Thread Timrov Iurii
Dear José, >V_ONCV_PBE_FR-1.0.upf This pseudpotential does not contain the atomic functions, I think, and that is why you have this error message. Greetings, Iurii -- Dr. Iurii TIMROV Postdoctoral Researcher STI - IMX - THEOS and NCCR - MARVEL Swiss Federal Institute of Technology