Re: [OMPI users] MPI_Put/Get with many nested derived type

Hi George, Thanks for your response. I confirmed that your commit fixed the issue. Regards, Akihiro On 2016/05/22 5:05, George Bosilca wrote: 16d9f71d01cc should provide a fix for this issue. George. On Sat, May 21, 2016 at 12:08 PM, Akihiro Tabuchi

[OMPI users] another problem with slot-list and openmpi-v2.x-dev-1441-g402abf9

Hi, I installed openmpi-v2.x-dev-1441-g402abf9 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 and gcc-6.1.0. Unfortunately I don't get the expected output with "--slot-list". It's the same behaviour for both compilers. loki hello_2 114 ompi_info | grep -e "OPAL repo

[OMPI users] problem with slot-list and openmpi-v2.x-dev-1441-g402abf9

Hi, I installed openmpi-v2.x-dev-1441-g402abf9 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.14 and gcc-6.1.0. Unfortunately I get a timeout error for "--slot-list". It's the same behaviour for both compilers. loki spawn 143 mpiexec -np 1 --host loki,loki,loki,nfs1,nfs1

[OMPI users] Open MPI does not work when MPICH or intel MPI are installed

Hi, I am using 2 software, one is called Open Foam and the other called EMPIRE that need to run together at the same time.Open Foam uses  Open MPI implementation and EMPIRE uses either MPICH or intel mpi.The version of Open MPI that comes with Open Foam is 1.6.5.I am using Intel (R) MPI Library

Re: [OMPI users] Open MPI does not work when MPICH or intel MPI are installed

Hi, The short answer: Environment module files are probably the best solution for your problem. The long answer: See , which pretty much addresses your question. Andy On 05/23/2016 07:40 AM, Megdich Islem wrote:

[OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

Hi, I installed openmpi-1.10.3rc2 on my "SUSE Linux Enterprise Server 12 (x86_64)" with Sun C 5.13 and gcc-6.1.0. Unfortunately I get a segmentation fault for "--slot-list" for one of my small programs. loki spawn 119 ompi_info | grep -e "OPAL repo revision:" -e "C compiler absolute:"

Re: [OMPI users] problem about mpirun on two nodes

On May 21, 2016, at 11:31 PM, dour...@aol.com wrote: > > I encountered a problem about mpirun and SSH when using OMPI 1.10.0 compiled > with gcc, running on centos7.2. > When I execute mpirun on my 2 node cluster, I get the following errors pasted > below. > > [douraku@master home]$ mpirun -np

Re: [OMPI users] Open MPI does not work when MPICH or intel MPI are installed

modules are way more friendly that manually setting and exporting your environment. the issue here is you are setting your environment in your .bashrc, and that cannot work if your account is used with various MPI implementations. (unless your .bashrc checks a third party variable to select the

Re: [OMPI users] segmentation fault for slot-list and openmpi-1.10.3rc2

I cannot replicate the problem - both scenarios work fine for me. I’m not convinced your test code is correct, however, as you call Comm_free the inter-communicator but didn’t call Comm_disconnect. Checkout the attached for a correct code and see if it works for you. FWIW: I don’t know how

[OMPI users] mpirun java

Dear all, I'm using openmpi for Java. I've a problem when I try to use more option parameters in my java command. More in detail I run mpirun as follow: mpirun -n 5 java -cp path1:path2 -Djava.library.path=pathLibs classification.MyClass It seems that the option "-Djava.library.path" is ignored

[OMPI users] wtime implementation in 1.10

I thought the 1.10 branch had been fixed to use clock_gettime for MPI_Wtime where it's available, a la https://www.open-mpi.org/community/lists/users/2016/04/28899.php -- and have been telling people so! However, I realize it hasn't, and it looks as if 1.10 is still being maintained. Is there a

Re: [OMPI users] wtime implementation in 1.10

Nobody ever filed a PR to update the branch with the patch - looks like you never responded to confirm that George’s proposed patch was acceptable. I’ll create the PR and copy you for review > On May 23, 2016, at 9:17 AM, Dave Love wrote: > > I thought the 1.10 branch

Re: [OMPI users] mpirun java

Hello Claudio, mpirun should be combining your java.library.path option with the one needed to add the Open MPI's java bindings as well. Which version of Open MPI are you using? Could you first try to compile the Ring.java code in ompi/examples and run it with the following additional mpirun

Re: [OMPI users] mpirun java

I tested with OpenMPI 1.10.1 and it works. See this example, which prints java.library.path mpijavac LibPath.java mpirun -np 2 java -Djava.library.path=path LibPath On Mon, May 23, 2016 at 1:38 PM, Howard Pritchard wrote: > Hello Claudio, > > mpirun should be combining

Re: [OMPI users] problem about mpirun on two nodes

Jeff, Thank you for your advice. By bad. I took the wrong shot, because I tested so many different settings. After I came back to the original network settings, "permission denied', of course disappeared, but the other messages were still there. The master node has two NICs, one for WAN (via

Re: [OMPI users] problem about mpirun on two nodes

You might want to test with some known-good MPI applications first. Try following the steps in this FAQ item: https://www.open-mpi.org/faq/?category=running#diagnose-multi-host-problems > On May 23, 2016, at 2:31 PM, dour...@aol.com wrote: > > Jeff, Thank you for your advice. > > By

Re: [OMPI users] mpirun java

Hi Howard. Thank you for your reply. I'm using version 1.10.2 I executed the following command: mpirun -np 2 --mca odls_base_verbose 100 java -cp alot:of:jarfile -Djava.library.path=/Users/stamile/Applications/IBM/ILOG/CPLEX_Studio1263/cplex/bin/x86-64_osx clustering.TensorClusterinCplexMPI

Re: [OMPI users] mpirun java

HI Ralph, Yep, If you could handle this that would be great. I guess we'd like a fix in 1.10.x and for 2.0.1 that would be great. Howard 2016-05-23 14:59 GMT-06:00 Ralph Castain : > Looks to me like there is a bug in the orterun parser that is trying to > add java library

Re: [OMPI users] users Digest, Vol 3510, Issue 2

"Open MPI does not work when MPICH or intel MPI are installed" Thank you for your suggestion. But I need to run OpenFoam and Empire at the same time. In fact, Empire couples OpenFoam with another software. Is there any solution for this case ? Regards,Islem Le Lundi 23 mai 2016 17h00,

Re: [OMPI users] users Digest, Vol 3510, Issue 2

what do you mean by coupling ? does Empire and OpenFoam communicate via MPI ? wouldn't it be much easier if you rebuild OpenFoam with mpich or intelmpi ? Cheers, Gilles On 5/24/2016 8:44 AM, Megdich Islem wrote: "Open MPI does not work when MPICH or intel MPI are installed" Thank you