Re: [OMPI users] OMPI users] Still "illegal instruction"

2016-09-21 Thread Mahmood Naderan
Dear Gilles, It seems that using GDB with MPI is a bit tricky. I read the FAQ about that. Please see the post at https://gcc.gnu.org/ml/gcc-help/2016-09/msg00078.html >i guess your gdb is also a bit too old to support all operations on a core file >(fwiw, i am able to do that on RHEL7) This is

Re: [OMPI users] Compilation without NVML support

2016-09-21 Thread Fred Mioux
Thank you for your answer. I already tried this but it doesn't work. Regards Fred Mioux 2016-09-20 16:50 GMT+02:00 Gilles Gouaillardet < gilles.gouaillar...@gmail.com>: > Fred, > > Can you try to configure with > --disable-nvml > > This is an option that should be passed to embedded hwloc. > > C

Re: [OMPI users] Compilation without NVML support

2016-09-21 Thread Fred Mioux
Thank you for your answer, I will try it. Regards, Fred Mioux 2016-09-20 17:02 GMT+02:00 Gilles Gouaillardet < gilles.gouaillar...@gmail.com>: > Brice, > > An other option is to add a --with-hwloc-flags configure option to Open > MPI, and pass the value to embedded hwloc configure. > We already

Re: [OMPI users] OMPI users] Compilation without NVML support

2016-09-21 Thread Gilles Gouaillardet
Fred, Unfortunatly it will not work. Embedded hwloc has its own configury logic and hence does not seem to interpret command line options. If hwloc is provided by your distro and fits your needs, you should use this one instead configure --with-hwloc=external Or configure --with-hwloc=DIR Cheer

Re: [OMPI users] OMPI users] Compilation without NVML support

2016-09-21 Thread Gilles Gouaillardet
That was a kind of braimstorming This is not implemented and cannot work, see my previous message Cheers, Gilles Fred Mioux wrote: >Thank you for your answer, I will try it. > > >Regards, > >Fred Mioux > > >2016-09-20 17:02 GMT+02:00 Gilles Gouaillardet : > >Brice, > > >An other option is to ad

Re: [OMPI users] job distribution issue

2016-09-21 Thread Jeff Hammond
Please include full details, such as: - complete input file, unless it is included in the output (this happens if you set "echo" in your input file, which you should always do as the first line) - complete output file, with both stdout and stderr - how you compiled NWChem -- all environment variabl