[vmtk-users] vmtkcenterlines

2012-08-10 Thread Eduardo - Yahoo
Hi everyone! I am trying to run vmtkcenterlines.py with some parameters but I can`t. I am using this command line *"vmtkcenterlines -seedselector idlist -sourceids 13910 -targetids 1054 13908 13907 -ifile ./Pasta/id1/id1_model.vtp -endpoints 1 --pipe vmtkcenterlineresampling -length 0.1 -ofile ./P

Re: [vmtk-users] vmtk spatial location question

2012-08-10 Thread Luca Antiga
Dear Anna, I finally get to reply - I took some time off in the meantime. This is a rough explanation of how image orientation in space are handled in vmtk and Slicer. Sorry if I'm stating the obvious for you, I'm being pedantic just to be sure. Images are typically acquired with an absolute or

Re: [vmtk-users] vmtkcenterlines

2012-08-10 Thread Luca Antiga
Hi Eduardo, it looks like point 13910 doesn't exist on the surface. How many vertices does the surface have? From the error, it looks like the surface has less than 13911 points. Best regards Luca On Aug 10, 2012, at 3:18 PM, Eduardo - Yahoo wrote: > Hi everyone! > > I am trying to run vmtk