If you use the terminal command: echo $SCRATCH
Does it return:
./
Looks like there might still be a problem with how SCRATCH is defined or
how "./" is resolved by your system.
In the error message, you can see:
/lunarc/nobackup/users/eishfh/WIEN2k/GaAs_ZB/David_project/3Mn001/ALL/test-so/*3Mn/./3Mn.vectordn_1*
The "./" may be the cause of the problem, because I would expect the
path to be:
/lunarc/nobackup/users/eishfh/WIEN2k/GaAs_ZB/David_project/3Mn001/ALL/test-so/*3Mn/3Mn.vectordn_1
*On 11/12/2016 5:33 PM, Md. Fhokrul Islam wrote:
Hi Prof. Blaha,
I wasn't aware of the bug but I will check the updates. I have
repeated calculation
with 16 cores (square processor grid) as you suggested but I still got
the same error.
As before, job crashes at lapwso. I don't see any missing file as you
can see from the
list of vector files.
-rw-r--r--. 1 eishfh kalmar 12427583862 Nov 12 10:04 3Mn.vectordn_1
-rw-r--r--. 1 eishfh kalmar 77760 Nov 12 10:26 3Mn.vectorsodn_1
-rw-r--r--. 1 eishfh kalmar 77760 Nov 12 10:26 3Mn.vectorsoup_1
-rw-r--r--. 1 eishfh kalmar 12428559726 Nov 12 04:17 3Mn.vectorup_1
Here are the dayfile and output error files. These are the only error
messages I got.
case.dayfile:
cycle 1 (Sat Nov 12 01:21:39 CET 2016) (100/99 to go)
> lapw0 -p(01:21:39) starting parallel lapw0 at Sat Nov 12
01:21:39 CET 2016
.machine0 : 16 processors
14031.329u 15.362s 14:40.87 1594.6% 0+0k 90152+1974560io 175pf+0w
> lapw1 -up -p -c (01:36:20) starting parallel lapw1 at Sat Nov
12 01:36:20 CET 2016
-> starting parallel LAPW1 jobs at Sat Nov 12 01:36:20 CET 2016
running LAPW1 in parallel mode (using .machines)
1 number_of_parallel_jobs
au188 au188 au188 au188 au188 au188 au188 au188 au188 au188 au188
au188 au188 au188 au188 au188(1) 121331.481u 33186.223s 2:41:04.62
1598.7% 0+0k 0+29485672io 118pf+0w
Summary of lapw1para:
au188 k=0 user=0 wallclock=0
121367.583u 33215.702s 2:41:06.83 1599.1% 0+0k 288+29487024io
121pf+0w
> lapw1 -dn -p -c (04:17:27) starting parallel lapw1 at Sat Nov
12 04:17:27 CET 2016
-> starting parallel LAPW1 jobs at Sat Nov 12 04:17:27 CET 2016
running LAPW1 in parallel mode (using .machines.help)
1 number_of_parallel_jobs
au188 au188 au188 au188 au188 au188 au188 au188 au188 au188 au188
au188 au188 au188 au188 au188(1) 233187.228u 100041.449s 5:47:30.00
1598.2% 0+0k 5832+35169304io 116pf+0w
Summary of lapw1para:
au188 k=0 user=0 wallclock=0
233263.580u 100102.639s 5:47:31.69 1598.7% 0+0k 6296+35170640io
118pf+0w
> lapwso -up -p -c (10:04:59) running LAPWSO in parallel mode
** LAPWSO crashed!
1233.319u 23.612s 21:29.72 97.4%0+0k 13064+7712io 17pf+0w
error: command
/lunarc/nobackup/users/eishfh/SRC/Wien2k14.2-iomkl/lapwsopara -up -c
lapwso.def failed
> stop error
---
lapwso.error file:
** Error in Parallel LAPWSO
** Error in Parallel LAPWSO
---
output error file:
LAPW0 END
LAPW1 END
LAPW1 END
forrtl: severe (39): error during read, unit 9, file
/lunarc/nobackup/users/eishfh/WIEN2k/GaAs_ZB/David_project/3Mn001/ALL/test-so/3Mn/./3Mn.vectordn_1
Image PCRoutineLine Source
lapwso_mpi 004634E3 Unknown Unknown Unknown
lapwso_mpi 0047F3C4 Unknown Unknown Unknown
lapwso_mpi 0042BA1F kptin_ 56 kptin.F
lapwso_mpi 00431566 MAIN__523
lapwso.F
lapwso_mpi 0040B3EE Unknown Unknown Unknown
libc.so.6 2BA34EDECB15 Unknown Unknown Unknown
lapwso_mpi 0040B2E9 Unknown Unknown Unknown
---
Thanks,
Fhokrul
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