I might have misplaced some merge request titles. Then please edit this list.
============================================ Short summary of 2022.01a release: short title (Merge Request count) Documentation (40 MRs) clang-format & reorganize (21 MRs) Bug fixes (19 MRs) Small improvements (19 MRs) Tests & checks & CI (18 MRs) Fluid & thermal & particle saturation (15 MRs) Packaging improvements & building (11 MRs) High precision RealHP<N> ComplexHP<N> ( 8 MRs) Examples ( 7 MRs) LevelSet ( 4 MRs) OpenMPI calculations ( 4 MRs) GUI ( 3 MRs) Polyhedra ( 1 MRs) Alpha shapes ( 1 MRs) Documentation (40 MRs) Add version badge, but only in html. In .pdf only put a link to svg. Docker install section in documentation Doc enhancements in CohFrict* (mostly) and NormShearPhys Homepage cleaning SpherePack.toSimulation docstring Docs HM - Viscous damping - updated the Hertz-Mindlin docs to clarify how viscosity is currently calculated in the code Fix broken links in docs Affiliation update Yade articles update Doc of http overview: mentioning lynx Updating momentRotationLaw doc in CohFrict classes HarmonicForceEngine Documentation Typo Add discord server link to home page, combine both wiki links into one. nicer keys for some bibitems + dodge czech accents issues with bibtex (sorry Václav Šmilauer) fix #219 : update docs about merging from other people's forks, cf. !511 Add bib reference Add 3 PHD-thesis from TUBAF improve git docs: add a link to the progit-book https://github.com/progit/progit2 Small mailmap update ymport.stl documentation Prog doc minor update about internal (Yade) bibliographic references Docstring typos Doc update of O.dynDt and O.dt Doc of O.save / O.load Documentation about how to add new GUI tests to the pipeline. sort ENABLE_* in CMakeLists.txt and in doc/sphinx/installation.rst Add comments & documentation about VTKRecorder and const Real& Clump discretization doc Improve documentation about clang-format / yapf3 Doc update about FEMLIKE feature ON by default Update yade-articles.bib Clump discretization doc updated again Increase clarity of thermalengine doc Replace obsolete YADE_REQUIRE_FEATURE in docs with info about #ifdef YADE_FEATURE Better url links in gitlab doc Doc 3rd edition fix one affiliation and release new DOI Add our high precision paper to bibliography doc/yade-articles.bib and HighPrecisionReal.rst PBCdoc - better DOCs - formulation.html periodic boundary conditions and yade.wrapper.Cell progTypoVector3rZero - Getting rid of historical Vector3R::ZERO in prog doc as well clang-format & reorganize (21 MRs) clang format single line if Small clang reformat Fix #175 - standarize start line #! in all the examples small clang reformat Python format preparations: to start work on #228 create scripts/python-formatter.sh using yapf3 Remove \ at end of line from *.py files, as recommended in yapf3 docs Python reformat: ./doc/sphinx splitting (1/7) from pkg/* the FileGenerator and other heavy stuff which are not physical models. splitting (2/7), merge after !733, split SnapshotEngine to postprocessing/image splitting (3/7), merge after !733, split PotentialBlock PotentialParticle to pkg/potential splitting (4/7), merge after !733, split Polyhedra to pkg/polyhedra splitting (5/7), merge after !733, !738, split VTKRecorder to postprocessing/vtk splitting (7/7), merge after !733, !739, split of Split Polyhedra.cpp → Polyhedra_01.cpp, Polyhedra_02.cpp splitting (6/7), further split of VTKRecorder splitting (7/7), split Shop and SpherePack to preprocessing/dem Python yapf3 reformat of ./py/tests/ Python yapf3 reformat: scripts/python-formatter.sh ./scripts/checks-and-tests Revert split VTKRecorder, PartialSatClayEngine, TwoPhaseFlowEngine Following discussion in !783 convert all files to UNIX line endings. Add line ending guard to the CI in make_minimal, just like clang-format. Small progress with #228 (yapf3 reformat), part of examples. Bug fixes (19 MRs) Collider optimization (fix #186) Fix some boost_python37 issue with cmake fix getRotStiffness for GlobalTimeStepper remove extra creepedShear (copied by accident from ViscoFrictPhys) Fix compilation with g++11 (a subset of !624) Fix issue #184 (aka question #694548) fix Qt inspector with deleted bodies (includes: don't try to find a defaut body at startup) Fix #200 collider segfault + function renaming fix condition that would result in missing virtual interactions when PFacets have parallel edges fix use of extMaterial in cylinderConnection (https://answers.launchpad.net/yade/+question/697238) extra test and fix for .def_readonly(…) function fix problem https://answers.launchpad.net/yade/+question/697874 Fix SnapshotEngine (part of issue #230) Fix #234 - On new QT5 versions: "The constructor with a shareWidget is deprecated", thanks Luc OGER! small fix in GUI tests, fix long double ubuntu 20.04 compilation. Lubrication keps calculation fix. Fix #244 - also lock bodies drawloopmutex when drawing interactions. Fix accuracy issue when solving a polynomial + don't erase active intractions in traction Fix color_cycle deprecated matplotlib warning Small improvements (19 MRs) remove compile warning Add virtual override keyword, add some const keywords; Fix #197 Add -Wshadow, simpler CMakeLists.txt fix #202 (-Wshadow name conflict) rename k → kParallelForeachIndexCounter in YADE_PARALLEL_FOREACH_BODY_BEGIN Add -Wswitch-default to CMakeLists.txt CMAKE_UNITY_BUILD (faster build times) documentation and smallfix Fix #204 - UNITY_BUILD works with cpp Logging Use boost::enable_shared_from_this, this should help with #199 (mess with type casting) and #205 (unintended python variables) Rename CentralGravityEngine → CentralConstantAccelerationEngine Add example for making screenshots of --stdperformance (examples/test/performance/checkPerf.py) Removing incomplete and unused TriaxialTest.biaxial2dTest add new HarmonicForceEngine, identical to HarmonicMotionEngine but applies force instead of displacement homogenize feature names and -DENABLE_FEATURE options in the cmake step Add script to get LP-questions Add option to allow gravity to be excluded from numerical damping in NewtonIntegrator A new onlyReal in O.interactions.has Not Urgent Change in Warning message Add blockMeshDict() to ymport.py - openfoam's blockMeshDict file can be imported into yade. ymport.py: Check FoamFile header and handle comments. Tests & checks & CI (18 MRs) Test GUI enum instead. skip mkHP_float in WIP and Draft. Don't flood the checks with warnings from BodyContainer and add LOG_ONCE_* Don't test Constants.hpp three times, small cleanup in tests. Add thermal engine check script 2 to pipeline temporarily increase btemp tolerance, fix #218, https://gitlab.com/yade-dev/trunk/-/jobs/1259015083 Fix #168 Use yade-data as submodule Fix #132 - add screenshot verification to GUI tests small fix in GUI test, don't print something that's not expected in a screenshot of a passed test Remove attempts to filter outliers while the test is running (it was incorrect) Add GUI test for hopper Small progress towards issue #169 and faster compilation: split PartialSatClayEngine, TwoPhaseFlowEngine into two smaller files each Add -Ofast native maximum optimization option to CMakeLists.txt Add GUI test for SnapshotEngine Fix #169 - 32 bit ASAN debug i386 build. Maybe remove i386 from pipeline CI, maybe discuss #239 See #241 : temporarily run debian bookworm check only on newer processors. Revert newhardware tag, because #241 is fixed. Fluid & thermal & particle saturation (15 MRs) report useful runtime errors and fix PartialSatClayEngine Quick bug fix for thermalengine Parallelize fluid conduction in ThermalEngine, brace for distro complaints. Increase checkThermalEngine.py tolerance because of ENABLE_FAST_NATIVE=ON HydroForceEngine: fix small errors in the fluid resolution HydroForceEngine: add initialization function and simplify turbulentFluctuations HydroForceEngine: modify and simplify averageProfile() HydroForceEngine: add new mixing length formulations to the fluid resolution fixing delT scope bug, thanks Zoheir Khademain. Pfv smallfix Parallelization of fluid conduction still tricky - reverting back to a stable state until a new solution can be pushed. HydroForceEngine and Law2_ScGeom_ViscElPhys_Basic: add an option to apply lubrication Make decoupleForces work as 1 way coupling Lubrication gap small fix Turn flow.defTolerance off by default Packaging improvements & building (11 MRs) Use clang-11 Build pkgs separately and link in one step Workaround #201 linker problems Add some needed dependencies for yade-deb Add DISABLE_ALL option Add archlinux support. Add debian/bookworm Update due to debian/bookworm Add Ubuntu 22.04 build Workaround for #155 (Freeglut 3, fgStructure.CurrentWindow is NULL - crash) Revert "Workaround for #155" - Freeglut is fixed. Drop all workarounds. High precision RealHP<N> ComplexHP<N> ( 8 MRs) Clang 11 RealHP, fix #193 small python HP improvements Use LOG_ONCE_* in DecomposedReal Extra static_assert tests for RealHP, ComplexHP Serialization of Complex numbers: both GUI and .xml / binary. Improve handling of complex numbers Proper high precision Complex support. MPFR ↔ MPC, float128 ↔ complex128 Precising HP doc Examples ( 7 MRs) Add example scripts for alpha shapes Add placeholder for high precision triple-pendulum example Add the triple pendulum script examples for our paper More alpha shape examples Conical Damage Model with pressure dependent inter-particle friction coefficient - implementation and examples of a new contact law HydroForceEngine examples: update and add new examples LevelSet example has been extended LevelSet ( 4 MRs) ISC is forced to be serial with 0 verletDist, avoiding the LOG_ERROR in that case LevelSet shape 0/N : beginning of several merge requests for giving a new LevelSet shape Level set 1/N: example and VTK visualization stuff - New Python functions or files, and modifications to VTKRecorder for visualization purposes. Level set (N-1)/N - LevelSet shaped bodies can now interact (without touching InteractionLoop as discussed at some point in the past). Add example & check. OpenMPI calculations ( 4 MRs) Dem8 benchmarks final update DEM8_Benchmarks: Silo Flow and the Penetration Test scripts using SI units (m-N-Pa-kg). revert !596 - see what happens with more testing: checkMPISilo.py Add mpi-default-bin to depends of yadedaily. Fixes #216 (some docker images didn't have mpirun command) GUI ( 3 MRs) Fix rendering of labels in Potential* Gl1 functors for wire=True Fix #27 - fix problem with wrong ETA estimation, by removing it. GUI serialization shows more info if there is an unhandled type. Polyhedra ( 1 MRs) Polyhedra warning about vertices number Alpha shapes ( 1 MRs) Add alpha shapes support & example -- -- Janek Kozicki, PhD. DSc. Arch. Assoc. Prof. Gdansk University of Technology (Gdansk Tech) Faculty of Applied Physics and Mathematics Department of Theoretical Physics and Quantum Information -- http://yade-dem.org/ http://pg.edu.pl/jkozicki (click English flag on top right) _______________________________________________ Mailing list: https://launchpad.net/~yade-dev Post to : yade-dev@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-dev More help : https://help.launchpad.net/ListHelp
