[Yade-users] [Question #683753]: save data in hdf5 file
New question #683753 on Yade: https://answers.launchpad.net/yade/+question/683753 Hello all, I want to save particle data in hdf5file. In order to do this, I need to import 'h5py' module. Can I install this module in Yade software? Thank you for your help in advance. Jinny Kim. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683753]: save data in hdf5 file
Question #683753 on Yade changed: https://answers.launchpad.net/yade/+question/683753 Description changed to: Hello all, I want to save particle data in hdf5file. In order to do this, I need to import 'h5py' module. I think I need to add 'h5py'module in Yade library, is it possible? Thank you for your help in advance. Jinny Kim. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683753]: save data in hdf5 file
Question #683753 on Yade changed: https://answers.launchpad.net/yade/+question/683753 Status: Open => Answered Jan Stránský proposed the following answer: Hi, > In order to do this, I need to import 'h5py' module. yes. it should be no problem (or?) > I think I need to add 'h5py'module in Yade library, is it possible? just use h5py in your python script (not sure what you mean by library) cheers Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683708]: Elastic potential energy of polyhedra
Question #683708 on Yade changed: https://answers.launchpad.net/yade/+question/683708 Vasileios Angelidakis posted a new comment: Hi Jan, Thanks for taking a look at this. I think assuming that V is proportional to u^3 using a fixed estimation can be risky, since it depends highly on the geometry of the overlap region. :p I like the idea of an equivalentPenetrationdepth, since it simplifies our problem in that the elastic potential work is F*equivalentPenetrationDepth (the integral of the force along the distance it acts on). Currently, this distance is estimated by dividing the penetrationVolume by the area perpendicularly to the contact normal direction. I think it would be more straightforward if we calculated two opposite points of the overlap volume, along the normal direction, passing from the contact point, and calculate the equivalentPenetrationDepth as the distance of these points. Calculating the equivalentPenetrationDepth deterministically can give us an exact calculation for the "area" as well (=penetrationVolume/equivalentPenetrationDepth), in case you have any other uses for this parameter. All the best, Vasileios -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683753]: save data in hdf5 file
Question #683753 on Yade changed: https://answers.launchpad.net/yade/+question/683753 Status: Answered => Open Jinny Kim is still having a problem: I tried that, but I got this error: ImportError: No module name h5py. When I run the python script, I am using this command in terminal: yade filename.py.. -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683753]: save data in hdf5 file
Question #683753 on Yade changed: https://answers.launchpad.net/yade/+question/683753 Status: Open => Needs information Jan Stránský requested more information: Have you installed h5py to your computer? If yes, how? If no, what version of yade you use? Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683753]: save data in hdf5 file
Question #683753 on Yade changed: https://answers.launchpad.net/yade/+question/683753 Status: Needs information => Open Jinny Kim gave more information on the question: Yes, I have installed it. I installed it with Miniconda by following [1]. [1] http://docs.h5py.org/en/stable/quick.html -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
Re: [Yade-users] [Question #683753]: save data in hdf5 file
Question #683753 on Yade changed: https://answers.launchpad.net/yade/+question/683753 Status: Open => Needs information Jan Stránský requested more information: Could be python 2/3 problem. What does Yade says if you type import sys; sys.version ? what is the output of command line commands python -c "import h5py" python3 -c "import h5py" ? thanks Jan -- You received this question notification because your team yade-users is an answer contact for Yade. ___ Mailing list: https://launchpad.net/~yade-users Post to : yade-users@lists.launchpad.net Unsubscribe : https://launchpad.net/~yade-users More help : https://help.launchpad.net/ListHelp
