To provide context: I've had the schubert-it.com pdf browser plugin around so as not to have to use have the Acrobat reader installed, for as long as I've known about it..
It appears that this plugin causes some internal conflict in Yojimbo; characterized by extraordinarily slow PDF display. The simple solution was that I moved the _PDF Browser Plugin.plugin_ file out of my internet plugins folder, restarted Yojimbo, and all appropriate speed returned to normal.
This is not an issue for me; I'm really happy with the recent improvements to Leopard's integration of Preview. Rather, it's mostly a problem with legacy software that caused issues that should probably be noted as a potential problem.
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