One other comment that I would like to add in reference to the
troubleshooting: is that I also tried removing "perl" from the command:
so:
root@webservices:~/.cpan/build/Text-SenseClusters-1.03-5f8DVC/Toolkit/clusterstop#
*clusterstopping.pl <http://clusterstopping.pl>
/usr/input_file/sample_clusters_stop_test.txt *
*clusterstopping.pl <http://clusterstopping.pl>: orden no encontrada*
*---- (in English: order not found)*
In this case, always using the same input data
I get the following error: which outputs 2 empty files:
*expr1384162590.cr.datexpr1384162590.pk3*
Sorry for the double mail: I just wanted to make clear all of my steps so
that I can understand what is going wrong and how it can be fixed - so that
I can start using the program! Thanks!!
On Mon, Nov 11, 2013 at 9:35 AM, Lauren Romeo <[email protected]>wrote:
> Hi and good morning,
> I resaved the file as a .txt (utf-8) and I am still getting the same error.
> This is the data in the file:
>
> 5 15
> 1 1.0000 3 0.5544 5 0.4431
> 2 1.0000 3 0.1386 4 0.4599 5 0.5413
> 1 0.5544 2 0.1386 3 1.0000
> 2 0.4599 4 1.0000
> 1 0.4431 2 0.5413 5 1.0000
>
> I found this data
> here<http://search.cpan.org/~tpederse/Text-SenseClusters-1.03/Toolkit/clusterstop/clusterstopping.pl>
> .
>
> This is the command that I have used:
> root@webservices:~/.cpan/build/Text-SenseClusters-1.03-5f8DVC/Toolkit/clusterstop#
>
> *perl clusterstopping.pl <http://clusterstopping.pl>
> /usr/SenseCluster/sample_clusters_stop_ test.txt *
>
> and this is the error that I continue to get:
>
>
>
> *h: cannot create
> /root/.cpan/build/Text-SenseClusters-1.03-5f8DVC/Toolkit/clusterstop//usr/SenseCluster/sample_clusters_stop_test.txt.1:
> Directory nonexistent Error while running vcluster --clmethod rb --crfun i2
> --sim cos --rowmodel none --colmodel none --nooutput
> /usr/SenseCluster/sample_clusters_stop_test.txt 1*
>
> Does this second part of the error have something to do with the command
> that I am entering? I have run successfully the *csh ./ALL-TESTS.sh *, so
> I was under the impression that it is correctly installed... should I try
> another command/another test?
>
> The first part of the error seems to be looking for a Directory (?) - so
> I reran the command this time finishing at a directory that I created that
> only contains this input file (I don't know if this is correct, I was
> troubleshooting): and I got this error:
>
> root@webservices:~/.cpan/build/Text-SenseClusters-1.03-5f8DVC/Toolkit/clusterstop#
> *perl clusterstopping.pl <http://clusterstopping.pl> /usr/input_file/*
>
>
>
>
>
>
>
>
> *Use of uninitialized value $line in scalar chomp at clusterstopping.pl
> <http://clusterstopping.pl> line 735. Use of uninitialized value $line in
> substitution (s///) at clusterstopping.pl <http://clusterstopping.pl> line
> 738.Use of uninitialized value $line in split at clusterstopping.pl
> <http://clusterstopping.pl> line 744. Use of uninitialized value $rcnt in
> numeric gt (>) at clusterstopping.pl <http://clusterstopping.pl> line
> 916.Use of uninitialized value $delta in concatenation (.) or string at
> clusterstopping.pl <http://clusterstopping.pl> line 918. Use of
> uninitialized value $thres in concatenation (.) or string at
> clusterstopping.pl <http://clusterstopping.pl> line
> 918.ERROR(clusterstopping.pl <http://clusterstopping.pl>): i2
> values do not converge for the delta value of (internally: ).
> Try using larger delta value. *
>
> I used the same sample file as before - I really do not know what I am
> doing wrong.
>
>
> Thank you again, in advance for any assistance/help, it is greatly
> appreciated.
>
>
>
> On Sun, Nov 10, 2013 at 8:13 PM, Ted Pedersen <[email protected]> wrote:
>
>> This error you report is a little unusual ...
>>
>> >however, the sample data that you provide in the website (I used to
>> >understand what I am
>> >doing) - continuously gives me the following error -- which is why I
>> have been >unable to solve the problem on my own --
>> >it is because I do not understand what the machine is requiring from me.
>>
>> >sh: cannot create
>> >/root/.cpan/build/Text-
>>
>> >SenseClusters-1.03->5f8DVC/Toolkit/clusterstop//homedtic/usr/SenseCluster/sense_clusters->sample.rtf.1:
>> >Directory nonexistent
>> >Error while running vcluster --clmethod rb --crfun i2 --sim
>> >cos --rowmodel none --colmodel none --nooutput
>> >/homedtic/usr/SenseCluster/sense_clusters-sample.rtf 1
>>
>> When I try to run clusterstopping with some of the sample data from
>> the documentation, I get the following..
>>
>> This is from the web page, stored in t2.txt
>>
>> 6 5
>> 1.3 2 0 0 3
>> 2.1 0 4 2.7 0
>> 1.3 2 0 0 3
>> 2.1 0 4 2.7 0
>> 1.3 2 0 0 3
>> 2.1 0 4 2.7 0
>>
>> ted@marimba:~$ clusterstopping.pl t2.txt
>> 1
>>
>> I notice you seem to be using an rtf file for the input data...my
>> guess is that this will be a problem. Could you try my example above
>> as a plain text file, and let me know what you get?
>>
>> Thanks!
>> Ted
>>
>> On Sat, Nov 9, 2013 at 9:46 AM, Lauren Romeo <[email protected]>
>> wrote:
>> > Hi Professor Pederson,
>> >
>> > I am a new SenseClusters user and I am particularly interested in one
>> Tool
>> > :: ClusterStopping. I have been trying to implement it using it as a
>> > standalone part of an experiment that I am running.
>> >
>> > In this way, I already have data that I am working with (3-column
>> > tab-separated format (target, slot-filler, weight)).
>> >
>> > Here is small (10-line) sample of the format of my input:
>> > abduction-n into+n-the+n-a-j-loss-n 1
>> > abduction-n into+n-the+n-a-small-cut-n 2
>> > abduction-n into+n-the+n-j-bleeding-n 1
>> > abduction-n into+n-the+n-j-loss-n 1
>> > zoonosis-n of+n-j+n-the-location-n 1
>> > zoonosis-n of+n-j+n-the-world-n 1
>> > zoonosis-n of+n-j+n-the-development-n 1
>> > zoonosis-n of+n-j+n-the-j-collection-n 1
>> > zoonosis-n of+n-j+n-the-j-success-n 1
>> > zoonosis-n of+n-j+ns-photo-n 1
>> >
>> >
>> > I have unsuccessfully been able to determine how I can translate my
>> data to
>> > a usable input file for this particular process.
>> >
>> > It is a rather large file (5GB). I am also not clear as to 1. if there
>> is an
>> > option to convert directly this format of
>> > data into a sparse format (considering the size I suppose that is the
>> best
>> > option), however, the sample data that you provide in the website (I
>> used to
>> > understand what I am
>> > doing) - continuously gives me the following error -- which is why I
>> have
>> > been unable to solve the problem on my own --
>> > it is because I do not understand what the machine is requiring from me.
>> >
>> > sh: cannot create
>> > /root/.cpan/build/Text-
>> >
>> SenseClusters-1.03-5f8DVC/Toolkit/clusterstop//homedtic/usr/SenseCluster/sense_clusters-sample.rtf.1:
>> > Directory nonexistent
>> > Error while running vcluster --clmethod rb --crfun i2 --sim
>> > cos --rowmodel none --colmodel none --nooutput
>> > /homedtic/usr/SenseCluster/sense_clusters-sample.rtf 1
>> >
>> >
>> > Any assistance that you can provide to me would be fantastic, I have
>> been
>> > really trying to search online for
>> > answers --- looking at the sample testdata in available in the program
>> etc.,
>> > but I have come to a deadend. Do you think
>> > you would be able to provide me with any assistance regarding how my
>> data
>> > can be potentially used with your
>> > clusterstopping.pl program?
>> >
>> > In advance, thank you very much for any assistance you might
>> > be able to give.
>> >
>> > Again, thank you very much.
>> >
>> >
>> >
>> >
>> ------------------------------------------------------------------------------
>> > November Webinars for C, C++, Fortran Developers
>> > Accelerate application performance with scalable programming models.
>> Explore
>> > techniques for threading, error checking, porting, and tuning. Get the
>> most
>> > from the latest Intel processors and coprocessors. See abstracts and
>> > register
>> >
>> http://pubads.g.doubleclick.net/gampad/clk?id=60136231&iu=/4140/ostg.clktrk
>> > _______________________________________________
>> > senseclusters-users mailing list
>> > [email protected]
>> > https://lists.sourceforge.net/lists/listinfo/senseclusters-users
>> >
>>
>>
>>
>> --
>> Ted Pedersen
>> http://www.d.umn.edu/~tpederse
>>
>>
>> ------------------------------------------------------------------------------
>> November Webinars for C, C++, Fortran Developers
>> Accelerate application performance with scalable programming models.
>> Explore
>> techniques for threading, error checking, porting, and tuning. Get the
>> most
>> from the latest Intel processors and coprocessors. See abstracts and
>> register
>>
>> http://pubads.g.doubleclick.net/gampad/clk?id=60136231&iu=/4140/ostg.clktrk
>> _______________________________________________
>> senseclusters-users mailing list
>> [email protected]
>> https://lists.sourceforge.net/lists/listinfo/senseclusters-users
>>
>
>
>
> --
> Lauren Romeo
>
> +34 687 18 29 86 - mobile
> www.laurenmromeo.com
>
--
Lauren Romeo
+34 687 18 29 86 - mobile
www.laurenmromeo.com
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