Hi everybody,
thanks for your interest.

The program is really not functioning ideally and needs a lot of explanations, that's why I don't post it for the whole community. I've tested it with the simple particular case and found that it gives the same qualitative results as Mulliken (I needed it for analysis of XPS shifts), so I never pursued it to the final working stage.

I'm trying to set up my blog and make it available there soon, with detailed explanations.

Marcos, the idea is to get peaks of charge on all atoms to make the Bader program see the atom. If you manage to add for example a Gaussian charge of 1 on H with the radius which is small enough to stay in the basin of that H, the program would see the atom but would count an extra 1 electron on that H. All you need to do next, is to subtract that 1 from the result calculated by the Bader program.

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