Where does SIESTA define the, at least initial, orientation of each orbital?

I.E the x,y,z directions that define the direction of the px,py and pz
orbitals, for example.

>From what I can make out it they seem to be the same as the x,y,z
directions used to define the unit cell (the ion core locations and so
on) - this would mean simply rotating your atomic cluster through
x,y,z would change the SCF cycle, which doesnt sound right.

With thanks

Ian Shuttleworth

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