Dear Juan,

I'm not sure what you mean by shape. Are you asking why it's lifted off the horizontal axis?

It is lifted off the horizontal axis to ensure that the Green's function behaves smoothly away from the real axis, allowing for a nice numerical scheme for the integration. You give the distance as a number of poles of the Fermi-Dirac distribution because Cauchy's theorem tells you that the integral of a contour is the sum of the enclosed residues, which are determined by the poles in the integrand.

This is pretty much the discussion Brandbyge has in the PRB paper you cite, on pages 4 and 5.

If the complex integration is troubling you, you may want to read up on Cauchy's theorem. Also, the important thing about the Fermi-Dirac distribution, in this case, is just the location of its poles, which should be evident by inspection of the function.

Hope this helps,

-Jonathan


On 06/01/2012 10:09 AM, Juan Manuel Aguiar wrote:
Dear Users,
Can I assume that nobody understands this issue or knows a reference?
Sincerely

Juan Manuel

On Thu, May 31, 2012 at 4:47 PM, Juan Manuel Aguiar
<[email protected]>  wrote:
Dear Siesta Users,
I'm trying to understand the particular shape chosen for the contour
integration for the density matrix in transiesta. I've already read
the paper where the method is explained [Phys. Rev. B 65, 165401
(2002); pag 5, fig 2] but there the contour is only mentioned, not
explained. I didn't find this contour in the literature I've found
about contour integration in NEGF calculations.

I think that the answer must be very easy for the well documented
user, so I ask you to share with me your knowledge or a reference
where this particular shape for the contour integration is justified.

Regards

Juan Manuel

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