Hello,
I am facing running problems of SIESTA 3.2 (and TRUNK433) in Itanium
architecture in the CENAPAD (Brazilian High Computing Facility:
http://www.cenapad.unicamp.br/index.html).
The architecture, compiler and libraries tested were:
(all the calculations run under PBS queued system)
Architecture: Itanium2 IA64 Processor
Operational System: SUSE LINUX Enterprise Server 9 (ia64) Kernel
2.6.5-7.244-sn2
Compilers: Intel Fortran 10.1
GNU gfortran 4.4.6
Mathematical Libraries Intel: MKL: 10.0.3.020 OR 10.2.7.041
Parallel MPI libraries: SGI/MPT-1.18
OpenMPI-1.4.4 OR 1.6.4
MPICH-3.0.4
Intel(R) MPI Library 3.2.1 for Linux
Mathematical Libraries from NETLIB: BLAS, LAPACK, BLACS and SCALAPACK
compiled with Intel OR GNU.
The compilation was ok. The problem came when running the jobs. Some of the
errors are bellow.
Does any one have successfully compile AND run SIESTA in Itanium
architectures with any combination of the compilers, math libraries and
parallel libraries above? Can you share your arch.make file?
Best regards,
Camps
PS: The errors are many and always different for the different combinations
of compiler+math libraries+parallel libraries.
*****
fortcom: Error: fdf.F90, line 356: There is no matching specific function
for this generic function reference. [FDF_GET]
debug_level = fdf_get('fdf-debug', 0)
fortcom: Error: fdf.F90, line 386: The type of the actual argument differs
from the type of the dummy argument. [IERR]
call MPI_Initialized(mpiflag, ierr)
*****
MPI: On host sg4gv2, Program /home/sgi/proj/proj416/icamps/
bin/siesta32-paranew, Rank 3, Process 16198 received signal SIGSEGV(11)
MPI: --------stack traceback-------
sh: idb: command not found
MPI: -----stack traceback ends-----
MPI: On host sg4gv2, Program
/home/sgi/proj/proj416/icamps/bin/siesta32-paranew, Rank 3, Process 16198:
Dumping core on signal SIGSEGV(11) into directory
/home/sgi/proj/proj416/icamps/icamps/PbSnO/PbO2/000Pb
MPI: MPI_COMM_WORLD rank 3 has terminated without calling MPI_Finalize()
MPI: aborting job
MPI: Received signal 11
*****
MPI: On host sg4gv2, Program /home/sgi/proj/proj416/icamps/
bin/siesta-trunk433-para, Rank 0, Process 16109 received signal SIGSEGV(11)
MPI: --------stack traceback-------
sh: idb: command not found
MPI: -----stack traceback ends-----
MPI: On host sg4gv2, Program
/home/sgi/proj/proj416/icamps/bin/siesta-trunk433-para, Rank 0, Process
16109: Dumping core on signal SIGSEGV(11) into directory
/home/sgi/proj/proj416/icamps/icamps/PbSnO/PbO2/000Pb
MPI: MPI_COMM_WORLD rank 0 has terminated without calling MPI_Finalize()
MPI: aborting job
MPI: Received signal 11
*****
** Maximum dynamic memory allocated = 251 MB
siesta(15841): unaligned access to 0x600000000005c824, ip=0x40000000009c96c1
siesta(15842): unaligned access to 0x600000000005c824, ip=0x40000000009c96c1
siesta(15843): unaligned access to 0x600000000005c824, ip=0x40000000009c96c1
siesta(15844): unaligned access to 0x600000000005c824, ip=0x40000000009c96c1
siesta(15841): unaligned access to 0x607ffffffe6142f4, ip=0x40000000009c9001
{ 0, 0}: On entry to DESCINIT parameter number 7 had an illegal
value
ERROR : Blacs setup has failed in cdiag!
ERROR STOP from Node: 0
{ 0, 1}: On entry to DESCINIT parameter number 7 had an illegal
value
{ 0, 2}: On entry to DESCINIT parameter number 7 had an illegal
value
{ 0, 3}: On entry to DESCINIT parameter number 7 had an illegal
value
ERROR : Blacs setup has failed in cdiag!
ERROR STOP from Node: 0
ERROR : Blacs setup has failed in cdiag!
ERROR : Blacs setup has failed in cdiag!
ERROR STOP from Node: 3
ERROR STOP from Node: 3
MPI: On host sg2gq1, Program
/home/sgi/adm/supsof/kusel/siesta/siesta-3.2/Obj/siesta, Rank 0, Process
15841 called MPI_Abort(<communicator>, 1)
MPI: --------stack traceback-------
ERROR : Blacs setup has failed in cdiag!
ERROR STOP from Node: 1
ERROR : Blacs setup has failed in cdiag!
ERROR STOP from Node: 1
ERROR : Blacs setup has failed in cdiag!
ERROR : Blacs setup has failed in cdiag!
ERROR STOP from Node: 2
ERROR STOP from Node: 2
sh: idb: command not found
MPI: -----stack traceback ends-----
MPI: MPI_COMM_WORLD rank 0 has terminated without calling MPI_Finalize()
MPI: aborting job
*
[]'s,
@mps
