Dear Ulas,

I've looked at your .out file and it seems to me that your method is mostly
good, but I do have a suggestion and I hope it helps, regarding your basis
set: with transition metal oxides, I have found that the inclusion of
semicore states is at times absolutely essential to find the correct global
energy minima. That could be your problem here. In your case I would
include 4p semicore states for Y and the 4f and 5d states for Bi. For help
on how to do this, take a look at this basis input for Bi with semicore
states included (or other elements, or search SIESTA-L):
http://www.icmab.es/leem/siesta/Databases/BasisSets/Bi/gga/ - you will need
to explicitly specify the basis of all your atoms in the fdf file and also
need to create a new pseudopotential files for Y and Bi, created with the
atom program. For O, you can look for a basis set inside a metal oxide as
well. You can try to approach a reasonable lattice constant first, then use
the simplex method in siesta-xxx-/Util/Optimizer to fine tune the soft
confinement parameters and cutoff radii of the basis with your
half-optimized crystal structure, then relax the lattice vectors again
using your optimized basis. There are ample tutorials on the simplex
method, both included in SIESTA's documentation in the Optimizer directory
and also elsewhere on SIESTA-L. I'm pretty sure the inclusion of semicore
states with correct pseudopotentials and a well-defined optimized basis set
will get you to where you want to be just fine.

Hearty cheers!


On Tue, Aug 6, 2013 at 9:43 AM, Ulas Koroglu <[email protected]> wrote:

> Dear Siesta Users and Developers,
>
> I try to optimize BiYO3 crystal that has the cubic structure. While
> experimental value of lattice parameter is a=5.484 Angstrom, but I found
> a=4.095 Angstrom during the geometry optimization in Siesta 3.1.
> There is a big different between the two (experimental and theoretical)
> values. I used many ways to correct the theoretical result ( a=4.095
> Angstrom) but, I didn't achieve. I did not understand what problem is. If
> you can suggest me a solution, I would be very appreciated.
>
> I have attached the input and output files.
>
> Best regards.
>
> Ulas Koroglu.
>
>
>


-- 
*Abraham Hmiel*
Katherine Belz Groves Fellow in Nanoscience
Xue Group, College of Nanoscale Science and Engineering at SUNY Albany
http://abehmiel.net/about

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