It needs to be "-g cube" (lowercase).

Kind regards Nick


2014-04-09 20:29 GMT+00:00 Behnaz Bagheri <[email protected]>:

> Dear Siesta users,
>
> I have a problem regarding EigneChannels. I am trying to redo this
> tutorial :
> http://dipc.ehu.es/frederiksen/tstutorial/index.php/1D_Si_chain
>
> I want to visualize Isosurfaces.  Using EigenChannels, I can get the
> *.macu files. Unfortunately I was not able to install the old version of
> Molekel(molekel4.3) on my computer to load *.macu files. So I tried to
> generate *.cube file using EigenChannels -g CUBE then I could use VMD. It
> didn't give me any error but  didn't generate *.cube files. I am using
> Inelastica1.1 and EigenChannel -h gives me this:
> Options:
>   -h, --help            show this help message and exit
>
>   Options for Eigenchannels:
>     -n NUMCHAN, --NumChan=NUMCHAN
>                         Number of eigenchannels [4]
>     -B, --BothSides     Calculate eigenchannels from both sides [No]
>     -r RES, --Res=RES   Resolution [0.4 Ang]
>     -g CUBE, --cube=CUBE
>                         Real space file format 'macu' or 'cube'
>     -N NUMPHCURR, --NumPhCurr=NUMPHCURR
>                         Max number of changes in bond currents from
> inelastic
>                         scattering  [10]
>
>   Options for Eigenchannels and Inelastica:
>     -e EF, --Ef=EF      Fermi energy [0.0 eV]
>     -f FDFFILE, --fdf=FDFFILE
>                         fdf file used for transiesta calculation
> [./RUN.fdf]
>     -p PHONONNETCDF, --PhononNetCDF=PHONONNETCDF
>                         Electron-phonon coupling NetCDF [none]
>     -s ISPIN, --iSpin=ISPIN
>                         Spin channel [1]
>     -k KPOINT, --kPoint=KPOINT
>                         2D k-point in range [0,1] given as string!
>                         default='[0.0,0.0]'
>
>
> I would be thankful if anybody can help me.
>
> With kind regards,
> Behnaz
>



-- 
Kind regards Nick

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