Dear Nick, many thanks for your reply! I will have a test run and see whether I can fix the problem. Cheers!

Jin


On 18/12/14 18:17, Nick Papior Andersen wrote:
I can't really see any ambiguity in the error message?
It really does mean:
'The electrodes are not situated in the same coordinates.'
The electrode atomic coordinates (from the separate electrode calculation) does not match the electrode atomic coordinates in the system calculation.

Transiesta (the trunk version) is so kind to actually print out the electrode coordinates... So you could just copy-paste those...

I can't remember how it worked in 3.2... But try a wrong electrode coordinate to see if it checks the coordinates at all. :)



2014-12-18 6:25 GMT+01:00 Jingxian Yu <[email protected] <mailto:[email protected]>>:

    Dear All,

    I did my transiesta calculations with Siesta 3.2. All ran well! At
    least, I didn't see any error messages. However when I test these
    same jobs with Siesta-trunk-462, I get the error message 'The
    electrodes are not situated in the same coordinates. Please correct.'

    Can anyone explain what it means? Any hints on how I should check
    my electrode coordinates? I feel a bit lost since I quoted this
    set of electrode coordinates from a previous article published by
    other group.

    Cheers!

    JIn




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Kind regards Nick

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