On Jan 14, 2012, at 23:35, Nicole Busch wrote:

> Thank you so much Thomas,
> I am afraid I am not sure where or how I would put this script in, do you 
> know how I would do this?  Just to clarify I can usually just click "export" 
> and then choose the file type as "pdf with embedded notes" and that usually 
> works with the exception of about 3 files I have been sent so far.  Do you 
> think this script would help this?
> Thanks again for your help!
> Nicole

Probably not. If you can't save with embedded notes, than almost certainly the 
PDF is print protected, which also means it cannot be saved without the owner 
password.

Christiaan

> 
> On Fri, Jan 13, 2012 at 11:17 PM, Thomas Schneider <schne...@mail.nih.gov> 
> wrote:
> Nicole:
> 
> > I am a teacher and have been using skim to mark pdf files online.
> > Occasionally I get a PDF file that I can open in skim make my notes,
> > and export as a pdf with embedded notes, but when I open this file
> > with Adobe, I can't see the notes I made.  If I open it in Skim, the
> > notes are still there.  It has happened on a few files but for the
> > most part I can export the file with notes and I can see them just
> > fine.  I don't know what I am doing wrong.  If you could please help
> > me I would really appreciate it.
> 
> Skim keeps its notes in the file system, not in the PDF itself.  I
> think this probably trips up every new user.  What you have to do is
> "embed" the notes into the actual pdf.  I put a script at:
> 
> http://alum.mit.edu/www/toms/ftp/skimembed
> 
> that you can use.
> 
> Tom
> 
>  Thomas D. Schneider, Ph.D.
>  National Institutes of Health
>  National Cancer Institute
>  Gene Regulation and Chromosome Biology Laboratory
>  Molecular Information Theory Group
>  Frederick, Maryland  21702-1201
>  301-846-5581
>  http://alum.mit.edu/www/toms (permanent)
> 
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