Ah, thanks for that. There See even dedicated Python libraries for xargs read 
access :)

Last question: which format did you save the notes in? Just so I know how to 
properly parse :) Is it one of the Obj-C data-types like NSArray?



> On Oct 5, 2015, at 12:03 AM, Christiaan Hofman <cmhof...@gmail.com> wrote:
> 
> 
>> On Oct 4, 2015, at 23:59, David Becher <becher.da...@googlemail.com> wrote:
>> 
>> Hello there,
>> 
>> I am right now typing up a python script which - hopefully - can extract the 
>> notes of a given PDF file annotated with Skim. I don't want to use 
>> AppleScript, on the one hand it is actually possible with AppleScript to 
>> export the notes to text, however it does not provide enough information 
>> (color of highlight e.g.).
>> 
>> However, i can't seem to find the physical location in which Skim writes 
>> these notes. It is not the PDF file itself, since its md5sum does not 
>> change. I tried narrowing it down by using `lsof -p <Skim-PID>`, however 
>> ultimately I could not find the file in which it is being stored.
>> 
>> Can maybe someone help me out? I would have a look at the source code, 
>> however I don't know a thing about Objective-C at all.
>> 
>> All the best,
>> David
> 
> It’s in the extended attributes of the file. That’s also mentioned on the 
> Wiki.
> 
> Christiaan
> 
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