I recently also came across this issue. Skim reached 27 GB Memory
yesterday when it became unresponsive.
And Preview behaves the same when I open a large number of PDFs so it's
most definitely a PDFKit issue. Was there any response from Apple on this?
I did have a large number of PDFs open, true, but I've never had an issue
before. I'm attaching a sample I took after Skim became unresponsive just
in case that could be of interest.
On Tue, Jan 5, 2016 at 9:14 PM, Christiaan Hofman <cmhof...@gmail.com>
wrote:
>
> On Dec 20, 2015, at 23:18, José Miguel Figueroa-O'Farrill <
> j.m.figue...@ed.ac.uk> wrote:
>
> Hi,
>
> I’m running Skim Version 1.4.16 (90) on Mac OS X Version 10.11.2 (15C50).
>
> I wonder whether anyone else has seen this behaviour: Skim is using a huge
> amount of RAM. According to Activity Monitor, Skim is using
>
> Skim | 13.42 GB | 7.49 GB | 11 | 283
>
> in the notation
>
> App | Memory | Compressed Memory | Threads | Ports
>
> In fact, the system ran out of application memory yesterday and I think it
> was due to Skim. (It was one of two apps which were not responding.)
>
> I’ve gone back to 1.4.15 (89) for now.
>
> Cheers,
> José
>
>
> BTW, it does seem like more people are seeing this. Moreover, it is also
> seen in Preview. That means, as I would expect if it’s really there, that
> it’s a bug in PDFKit in ElCap (one of many serious bugs, unfortunately).
> I’ve reported this to Apple, but given how (non) responsive they are on the
> even more obvious and visible (and simpler to fix!) bugs, I don’t expect
> them to fix this before 10.12.
>
> Christiaan
>
>
>
> ------------------------------------------------------------------------------
>
> _______________________________________________
> Skim-app-users mailing list
> Skim-app-users@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/skim-app-users
>
>
Sampling process 4343 for 3 seconds with 1 millisecond of run time between
samples
Sampling completed, processing symbols...
Analysis of sampling Skim (pid 4343) every 1 millisecond
Process: Skim [4343]
Path: /Applications/Skim.app/Contents/MacOS/Skim
Load Address: 0x100000000
Identifier: net.sourceforge.skim-app.skim
Version: 1.4.17 (91)
Code Type: X86-64
Parent Process: ??? [1]
Date/Time: 2016-02-03 21:28:44.576 +0530
Launch Time: 2016-02-01 15:22:50.637 +0530
OS Version: Mac OS X 10.11.3 (15D21)
Report Version: 7
Analysis Tool: /usr/bin/sample
----
Call graph:
2677 Thread_6076073 DispatchQueue_1: com.apple.main-thread (serial)
+ 2677 start (in Skim) + 52 [0x100001d84]
+ 2677 NSApplicationMain (in AppKit) + 1176 [0x7fff9356c520]
+ 2677 -[NSApplication run] (in AppKit) + 682 [0x7fff935e9fc8]
+ 2677 -[NSApplication
_nextEventMatchingEventMask:untilDate:inMode:dequeue:] (in AppKit) + 454
[0x7fff939c0943]
+ 2677 _DPSNextEvent (in AppKit) + 1067 [0x7fff935f40ee]
+ 2677 _BlockUntilNextEventMatchingListInModeWithFilter (in
HIToolbox) + 71 [0x7fff94c0d5af]
+ 2677 ReceiveNextEventCommon (in HIToolbox) + 432
[0x7fff94c0d76f]
+ 2677 RunCurrentEventLoopInMode (in HIToolbox) + 235
[0x7fff94c0d935]
+ 2677 CFRunLoopRunSpecific (in CoreFoundation) + 296
[0x7fff96e50338]
+ 2677 __CFRunLoopRun (in CoreFoundation) + 1356
[0x7fff96e50aec]
+ 2677 __CFRunLoopServiceMachPort (in CoreFoundation)
+ 212 [0x7fff96e51624]
+ 2677 mach_msg (in libsystem_kernel.dylib) + 55
[0x7fff8b5e07c7]
+ 2677 mach_msg_trap (in libsystem_kernel.dylib) +
10 [0x7fff8b5e1386]
2677 Thread_6076121 DispatchQueue_2: com.apple.libdispatch-manager
(serial)
+ 2677 _dispatch_mgr_thread (in libdispatch.dylib) + 52 [0x7fff974d8d01]
+ 2677 _dispatch_mgr_invoke (in libdispatch.dylib) + 216
[0x7fff974d9099]
+ 2677 kevent_qos (in libsystem_kernel.dylib) + 10 [0x7fff8b5e7ff6]
2677 Thread_6076278: com.apple.NSEventThread
+ 2677 thread_start (in libsystem_pthread.dylib) + 13 [0x7fff8db98375]
+ 2677 _pthread_start (in libsystem_pthread.dylib) + 168
[0x7fff8db9ab90]
+ 2677 _pthread_body (in libsystem_pthread.dylib) + 131
[0x7fff8db9ac13]
+ 2677 _NSEventThread (in AppKit) + 149 [0x7fff936b3065]
+ 2677 CFRunLoopRunSpecific (in CoreFoundation) + 296
[0x7fff96e50338]
+ 2677 __CFRunLoopRun (in CoreFoundation) + 1356
[0x7fff96e50aec]
+ 2677 __CFRunLoopServiceMachPort (in CoreFoundation) + 212
[0x7fff96e51624]
+ 2677 mach_msg (in libsystem_kernel.dylib) + 55
[0x7fff8b5e07c7]
+ 2677 mach_msg_trap (in libsystem_kernel.dylib) + 10
[0x7fff8b5e1386]
2677 Thread_8156927: com.apple.NSURLConnectionLoader
+ 2677 thread_start (in libsystem_pthread.dylib) + 13 [0x7fff8db98375]
+ 2677 _pthread_start (in libsystem_pthread.dylib) + 168
[0x7fff8db9ab90]
+ 2677 _pthread_body (in libsystem_pthread.dylib) + 131
[0x7fff8db9ac13]
+ 2677 __NSThread__start__ (in Foundation) + 1351 [0x7fff86c75c6f]
+ 2677 +[NSURLConnection(Loader) _resourceLoadLoop:] (in
CFNetwork) + 412 [0x7fff9098c6e9]
+ 2677 CFRunLoopRunSpecific (in CoreFoundation) + 296
[0x7fff96e50338]
+ 2677 __CFRunLoopRun (in CoreFoundation) + 1356
[0x7fff96e50aec]
+ 2677 __CFRunLoopServiceMachPort (in CoreFoundation) + 212
[0x7fff96e51624]
+ 2677 mach_msg (in libsystem_kernel.dylib) + 55
[0x7fff8b5e07c7]
+ 2677 mach_msg_trap (in libsystem_kernel.dylib) + 10
[0x7fff8b5e1386]
2677 Thread_8157050: com.apple.CFSocket.private
+ 2677 thread_start (in libsystem_pthread.dylib) + 13 [0x7fff8db98375]
+ 2677 _pthread_start (in libsystem_pthread.dylib) + 168
[0x7fff8db9ab90]
+ 2677 _pthread_body (in libsystem_pthread.dylib) + 131
[0x7fff8db9ac13]
+ 2677 __CFSocketManager (in CoreFoundation) + 762 [0x7fff96e9d16a]
+ 2677 __select (in libsystem_kernel.dylib) + 10 [0x7fff8b5e7176]
2677 Thread_14320501
+ 2677 start_wqthread (in libsystem_pthread.dylib) + 13 [0x7fff8db98365]
+ 2677 _pthread_wqthread (in libsystem_pthread.dylib) + 1283
[0x7fff8db9a729]
+ 2677 __workq_kernreturn (in libsystem_kernel.dylib) + 10
[0x7fff8b5e76de]
2677 Thread_14320502
+ 2677 start_wqthread (in libsystem_pthread.dylib) + 13 [0x7fff8db98365]
+ 2677 _pthread_wqthread (in libsystem_pthread.dylib) + 1283
[0x7fff8db9a729]
+ 2677 __workq_kernreturn (in libsystem_kernel.dylib) + 10
[0x7fff8b5e76de]
2677 Thread_14321190
+ 2677 start_wqthread (in libsystem_pthread.dylib) + 13 [0x7fff8db98365]
+ 2677 _pthread_wqthread (in libsystem_pthread.dylib) + 1283
[0x7fff8db9a729]
+ 2677 __workq_kernreturn (in libsystem_kernel.dylib) + 10
[0x7fff8b5e76de]
2677 Thread_14321223
2677 start_wqthread (in libsystem_pthread.dylib) + 13 [0x7fff8db98365]
2677 _pthread_wqthread (in libsystem_pthread.dylib) + 1283
[0x7fff8db9a729]
2677 __workq_kernreturn (in libsystem_kernel.dylib) + 10
[0x7fff8b5e76de]
Total number in stack (recursive counted multiple, when >=5):
Sort by top of stack, same collapsed (when >= 5):
__workq_kernreturn (in libsystem_kernel.dylib) 10708
mach_msg_trap (in libsystem_kernel.dylib) 8031
__select (in libsystem_kernel.dylib) 2677
kevent_qos (in libsystem_kernel.dylib) 2677
Binary Images:
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0x10021c000 - 0x100229ff7
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<6460DEEA-1C19-3E6C-B8C1-C283CE8590BC>
/Applications/Skim.app/Contents/Frameworks/SkimNotes.framework/Versions/A/SkimNotes
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0x10993e000 - 0x10993efe7 +cl_kernels (???)
<6702001D-C0CA-4373-9E3F-DCAE8084438A> cl_kernels
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0x1196f1000 - 0x1196f2ff7 +cl_kernels (???)
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(24.4 - 24.5) <72156BE7-0804-3F90-9AF9-14C4739430C2>
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/SharedFileList.framework/Versions/A/SharedFileList
0x7fff94f43000 - 0x7fff94f54fff libcmph.dylib (6)
<BA4BF2C6-7F4E-33B8-9DD7-619C9EB83ECF> /usr/lib/libcmph.dylib
0x7fff94ffc000 - 0x7fff95207fff libFosl_dynamic.dylib (16.24)
<363B7CEE-B662-32F3-9D7B-245E64927C35> /usr/lib/libFosl_dynamic.dylib
0x7fff95289000 - 0x7fff95370ff7 libcrypto.0.9.8.dylib (59)
<ED1C2A26-8FFC-30FF-8726-FF952EF94ADF> /usr/lib/libcrypto.0.9.8.dylib
0x7fff953a5000 - 0x7fff953a7fff libCGXType.A.dylib (948)
<C3D473CF-7261-3E0D-A161-E9B642B75D6A>
/System/Library/Frameworks/CoreGraphics.framework/Versions/A/Resources/libCGXType.A.dylib
0x7fff953a8000 - 0x7fff953bbfff com.apple.CoreBluetooth (1.0 - 1)
<BF5F87E3-6AAA-3B1F-9979-7A03D77937C8>
/System/Library/Frameworks/CoreBluetooth.framework/Versions/A/CoreBluetooth
0x7fff953bc000 - 0x7fff953d9ff7 com.apple.AppleVPAFramework (2.1.2 -
2.1.2) <2B459E1F-0563-30B2-A04D-CF1793426B66>
/System/Library/PrivateFrameworks/AppleVPA.framework/Versions/A/AppleVPA
0x7fff953da000 - 0x7fff953f1fff libmarisa.dylib (4)
<E4919B03-D9BD-3AF8-B436-C415C98E3F0A> /usr/lib/libmarisa.dylib
0x7fff953f4000 - 0x7fff9543fff7 com.apple.CoreMediaIO (703.0 - 4791)
<A401D0BE-7618-3A75-A77D-2387CF168072>
/System/Library/Frameworks/CoreMediaIO.framework/Versions/A/CoreMediaIO
0x7fff9552d000 - 0x7fff95613fef unorm8_bgra.dylib (2.6.4.1)
<F2A325FF-D55F-3091-88E2-5EBF3648274A>
/System/Library/Frameworks/OpenCL.framework/Versions/A/Libraries/ImageFormats/unorm8_bgra.dylib
0x7fff95614000 - 0x7fff95614fff com.apple.Cocoa (6.11 - 22)
<0A634D46-B468-3CBC-B2A0-16C381C11BF2>
/System/Library/Frameworks/Cocoa.framework/Versions/A/Cocoa
0x7fff95615000 - 0x7fff95624fe7 com.apple.AppleFSCompression (81.20.2
- 1.0) <735A903C-EB3A-32EB-BA6B-C55644C59C5C>
/System/Library/PrivateFrameworks/AppleFSCompression.framework/Versions/A/AppleFSCompression
0x7fff95676000 - 0x7fff95906ff7 com.apple.RawCamera.bundle (6.18 -
828) <CB7F6CCD-3753-3147-816A-B613F500AE33>
/System/Library/CoreServices/RawCamera.bundle/Contents/MacOS/RawCamera
0x7fff95907000 - 0x7fff95936ff7 com.apple.securityinterface (10.0 -
55065.20.1) <EDBD990A-0960-3DBB-BB42-43A36F49477F>
/System/Library/Frameworks/SecurityInterface.framework/Versions/A/SecurityInterface
0x7fff95937000 - 0x7fff95939ff7 com.apple.securityhi (9.0 - 55006)
<B97C1C77-AA51-33ED-941D-F766BC94CD9E>
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/SecurityHI.framework/Versions/A/SecurityHI
0x7fff95958000 - 0x7fff95a75fff libsqlite3.dylib (216.4)
<DC3D59E7-91A3-374F-957C-6699729CD82B> /usr/lib/libsqlite3.dylib
0x7fff95a76000 - 0x7fff95a8afff com.apple.CoreDuetDaemonProtocol (1.0
- 1) <8D8A190B-3C08-3624-8DC6-E9EBE22BC3BB>
/System/Library/PrivateFrameworks/CoreDuetDaemonProtocol.framework/Versions/A/CoreDuetDaemonProtocol
0x7fff95acf000 - 0x7fff95ad0ff3 com.apple.print.framework.Print (10.0
- 266) <BF573614-5666-3D16-9D45-4690911F030A>
/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/Print.framework/Versions/A/Print
0x7fff95c19000 - 0x7fff95c69ff7 com.apple.Symbolication (1.4 - 58044)
<2EC9F04A-4370-39C8-8549-FC6411D87463>
/System/Library/PrivateFrameworks/Symbolication.framework/Versions/A/Symbolication
0x7fff95fea000 - 0x7fff95fedfff com.apple.Mangrove (1.0 - 1)
<7919AD18-0EDE-3408-A6AC-A9121B8D857F>
/System/Library/PrivateFrameworks/Mangrove.framework/Versions/A/Mangrove
0x7fff95fee000 - 0x7fff95ff2fff libGIF.dylib (1442)
<2F7DA684-3510-38C2-B48F-9D33194860A1>
/System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libGIF.dylib
0x7fff95ff3000 - 0x7fff96089fff com.apple.ColorSync (4.9.0 - 4.9.0)
<8BB8DF19-C24F-39F8-8B90-AD186D74587C>
/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/ColorSync.framework/Versions/A/ColorSync
0x7fff9608a000 - 0x7fff9608cff7 com.apple.SafariServices.framework
(11601 - 11601.4.4) <FB9EA83E-574E-31D4-AA47-B4EA086BF886>
/System/Library/PrivateFrameworks/SafariServices.framework/Versions/A/SafariServices
0x7fff961d9000 - 0x7fff96262ff7 com.apple.PerformanceAnalysis (1.0 -
1) <FB33FACE-5A99-34E0-83CC-CEDCCFAC74C3>
/System/Library/PrivateFrameworks/PerformanceAnalysis.framework/Versions/A/PerformanceAnalysis
0x7fff96263000 - 0x7fff96352fff libxml2.2.dylib (29.2)
<F70308DF-313F-334F-8F0E-82E79821583D> /usr/lib/libxml2.2.dylib
0x7fff96353000 - 0x7fff96355ff7 com.apple.xpc.ServiceManagement (1.0 -
1) <3777FD15-B6F3-32A2-A8E3-3E8CE3B8D5E7>
/System/Library/Frameworks/ServiceManagement.framework/Versions/A/ServiceManagement
0x7fff96397000 - 0x7fff9670aff7 com.apple.FinderKit (1.4.2 - 1.4.2)
<217CF784-DAED-361C-91E9-689F3DA0C617>
/System/Library/PrivateFrameworks/FinderKit.framework/Versions/A/FinderKit
0x7fff967a8000 - 0x7fff967d3ff7
com.apple.AddressBook.ContactsFoundation (8.0 - 2137.1)
<D4463131-B469-30B1-84C4-50DB1BAADC32>
/System/Library/PrivateFrameworks/ContactsFoundation.framework/Versions/A/ContactsFoundation
0x7fff967da000 - 0x7fff967dcfff libCVMSPluginSupport.dylib (12.0.40.6)
<C88875DF-9888-37A6-AE69-3CABFACDAF45>
/System/Library/Frameworks/OpenGL.framework/Versions/A/Libraries/libCVMSPluginSupport.dylib
0x7fff967dd000 - 0x7fff9687dfff com.apple.ViewBridge (159 - 159)
<A42BD1E4-C838-3135-B00E-8B051E42D5D3>
/System/Library/PrivateFrameworks/ViewBridge.framework/Versions/A/ViewBridge
0x7fff96883000 - 0x7fff968edff7 com.apple.framework.CoreWLAN (11.0 -
1101.20) <6A535459-6A8A-3D60-986B-EE7ED833A9C3>
/System/Library/Frameworks/CoreWLAN.framework/Versions/A/CoreWLAN
0x7fff96a11000 - 0x7fff96a5ffff libcurl.4.dylib (90)
<FF42FAA6-E71B-3D0D-B5C9-B05BD2460C9A> /usr/lib/libcurl.4.dylib
0x7fff96a87000 - 0x7fff96aa3ff7 libsystem_malloc.dylib (67)
<9EECAB18-F025-34C4-8E32-7EFFA6720EFC> /usr/lib/system/libsystem_malloc.dylib
0x7fff96aba000 - 0x7fff96abdff7 libsystem_sandbox.dylib (460.30.1)
<3E0036AF-FC64-3352-8DA4-6B550C2C2562> /usr/lib/system/libsystem_sandbox.dylib
0x7fff96abe000 - 0x7fff96ae5fff com.apple.shortcut (2.16 - 93)
<D9DD2F6A-4AC7-38BD-A3B6-A9682EFCCE2E>
/System/Library/PrivateFrameworks/Shortcut.framework/Versions/A/Shortcut
0x7fff96ae6000 - 0x7fff96b98fff com.apple.cloudkit.CloudKit (481.8 -
481.8) <E927AE82-8E55-38A4-BE6E-4D0829272653>
/System/Library/Frameworks/CloudKit.framework/Versions/A/CloudKit
0x7fff96b99000 - 0x7fff96bf4ff7 libTIFF.dylib (1442)
<FC2ADE78-3710-31E7-9CE7-44CD61F4B8DC>
/System/Library/Frameworks/ImageIO.framework/Versions/A/Resources/libTIFF.dylib
0x7fff96bf5000 - 0x7fff96c03fff com.apple.ToneLibrary (1.0 - 1)
<E92CE7C6-43CB-3312-9B1F-77353FE2C5DD>
/System/Library/PrivateFrameworks/ToneLibrary.framework/Versions/A/ToneLibrary
0x7fff96c04000 - 0x7fff96c37ff7 com.apple.MediaKit (16 - 809)
<BF8032FE-6645-37F6-A622-BC7EEE3EAABF>
/System/Library/PrivateFrameworks/MediaKit.framework/Versions/A/MediaKit
0x7fff96cb3000 - 0x7fff96dd8ff7 com.apple.LaunchServices (728.6 -
728.6) <204CD7A1-D99C-3655-82D7-E8E89F9C666B>
/System/Library/Frameworks/CoreServices.framework/Versions/A/Frameworks/LaunchServices.framework/Versions/A/LaunchServices
0x7fff96de1000 - 0x7fff97257fff com.apple.CoreFoundation (6.9 -
1256.14) <768A7FB7-9143-3148-8591-7C6ED3162D35>
/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation
0x7fff97258000 - 0x7fff972a8fff libcups.2.dylib (435)
<28A05475-9DBF-35EA-B218-3432B69EA18B> /usr/lib/libcups.2.dylib
0x7fff972a9000 - 0x7fff97338fff com.apple.CorePDF (4.0 - 4)
<6147B89F-46D8-38B2-A7D0-C5AABCE35BC6>
/System/Library/PrivateFrameworks/CorePDF.framework/Versions/A/CorePDF
0x7fff97339000 - 0x7fff97376ff3 com.apple.bom (14.0 - 193.7)
<9B8AE30B-24A3-37AB-B04E-4CE67AED4775>
/System/Library/PrivateFrameworks/Bom.framework/Versions/A/Bom
0x7fff97377000 - 0x7fff973c3ff7 com.apple.corelocation (1486.17 -
1615.38) <5AE891F7-ED25-3C6C-A8DD-5D702FB87DC7>
/System/Library/Frameworks/CoreLocation.framework/Versions/A/CoreLocation
0x7fff973c4000 - 0x7fff973cffff libcsfde.dylib (517.20.1)
<42376761-F1B3-3086-AFBC-231507582BBE> /usr/lib/libcsfde.dylib
0x7fff973d0000 - 0x7fff973e6fff com.apple.CoreMediaAuthoring (2.2 -
953) <D74307B6-EC7E-3E5F-B2CF-7CE7A183F0F0>
/System/Library/PrivateFrameworks/CoreMediaAuthoring.framework/Versions/A/CoreMediaAuthoring
0x7fff97443000 - 0x7fff97446ffb libdyld.dylib (360.19)
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0x7fff97485000 - 0x7fff97490fff libkxld.dylib (3248.30.4)
<BAA3DDEC-AD81-3C29-AECC-59E4AD114D3C> /usr/lib/system/libkxld.dylib
0x7fff974ba000 - 0x7fff974cafff libbsm.0.dylib (34)
<7E14504C-A8B0-3574-B6EB-5D5FABC72926> /usr/lib/libbsm.0.dylib
0x7fff974cb000 - 0x7fff974d0fff com.apple.TCC (1.0 - 1)
<C53628CA-0C75-34B6-AE6E-8BCF8A3ED099>
/System/Library/PrivateFrameworks/TCC.framework/Versions/A/TCC
0x7fff974d1000 - 0x7fff974fefff libdispatch.dylib (501.20.1)
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0x7fff974ff000 - 0x7fff974fffff com.apple.quartzframework (1.5 - 21)
<5DC3D0D9-9E3F-3AA5-92F1-F229907A49B9>
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0x7fff97587000 - 0x7fff97641fff com.apple.DiscRecording (9.0.1 -
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/System/Library/Frameworks/DiscRecording.framework/Versions/A/DiscRecording
0x7fff97643000 - 0x7fff9764aff7 com.apple.phonenumbers (1.1.1 - 105)
<A616AFB5-2336-385A-B058-16A423D2B21B>
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0x7fff9764e000 - 0x7fff9765cfff com.apple.IntlPreferences (2.0 - 192)
<CACF49DE-A307-3066-B168-B47DFC531B97>
/System/Library/PrivateFrameworks/IntlPreferences.framework/Versions/A/IntlPreferences
0x7fff97664000 - 0x7fff978b0ff7 com.apple.AddressBook.framework (9.0 -
1679.4) <B18B0933-04A3-3092-9B33-C9C91AF59E00>
/System/Library/Frameworks/AddressBook.framework/Versions/A/AddressBook
Sample analysis of process 4343 written to file /dev/stdout
------------------------------------------------------------------------------
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