See $SLURM_ARRAY_TASK_ID as described here: http://slurm.schedmd.com/job_array.html
Quoting Guillaume Landry <[email protected]>:
Dear slurm-dev, I am using the following script for slurm (part of another script with arguments $1 executable, $2 input file, $3 macro file and $4 number of jobs to be ran with different seeds between 0 and $4: cat <<EOL|sbatch #!/bin/bash #SBATCH --job-name='$1'_'$2'_'$3' #SBATCH --workdir='$PWD' #SBATCH --export=ALL #SBATCH --array=0-'$4' #SBATCH --output='$PWD'/logs/'$1'_'$2'_log/'$1'_'$2'_%a_%j_%N.log #SBATCH --error='$PWD'/err/'$1'_'$2'_log/'$1'_'$2'_%a_%j_%N.err #SBATCH --mem-per-cpu='$memory2' """#SBATCH --nodelist=gar-cl-mednd06""" """#SBATCH --mail-type=ALL""" cd $PWD $1 $2 $3 $IDOFTHEJOB EOL My issue is that I need $IDOFTHEJOB to be equivalent to the %a used in error and output (for example here varying between 0 and $4). i tried using %a but it seems that it is not intepreted correctly for the command (it works fine for output and error). Regards, Guillaume -- Guillaume Landry Ludwig-Maximilians-Universität München (LMU) Medical Physics Chair (LS Parodi) Am Coulombwall 1 85748 Garching Tel:+49 (0) 89 289-14077 Fax:+49 (0) 89 289-14072
