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Regards, Mahmood On Tue, Jan 1, 2019 at 2:34 PM Mahmood Naderan <[email protected]> wrote: > Hi, > May I know why the exported path in my sbatch script doesn't work? > > [mahmood@rocks7 qe]$ cat slurm_script.sh > #!/bin/bash > #SBATCH --ntasks=4 > #SBATCH --mem=2G > #SBATCH --partition=RUBY > #SBATCH --account=y4 > export PATH=$PATH:/share/apps/softwares/q-e-qe-6.2.1/bin > mpirun pw.x mos2.in output.out > [mahmood@rocks7 qe]$ sbatch slurm_script.sh > Submitted batch job 243 > [mahmood@rocks7 qe]$ cat slurm-243.out > -------------------------------------------------------------------------- > mpirun was unable to find the specified executable file, and therefore > did not launch the job. This error was first reported for process > rank 0; it may have occurred for other processes as well. > > NOTE: A common cause for this error is misspelling a mpirun command > line parameter option (remember that mpirun interprets the first > unrecognized command line token as the executable). > > Node: compute-0-2 > Executable: pw.x > -------------------------------------------------------------------------- > 4 total processes failed to start > > > That folder is shared between compute nodes as you can see below > > [mahmood@rocks7 qe]$ rocks run host compute-0-2 "ls > /share/apps/softwares/q-e-qe-6.2.1/bin" > Warning: untrusted X11 forwarding setup failed: xauth key data not > generated > casino2upf.x > cpmd2upf.x > cppp.x > cp.x > fhi2upf.x > fpmd2upf.x > interpolate.x > iotk > iotk_print_kinds.x > iotk.x > ld1.x > manycp.x > ncpp2upf.x > oldcp2upf.x > read_upf_tofile.x > rrkj2upf.x > test.x > upf2casino.x > uspp2upf.x > vdb2upf.x > virtual.x > wfdd.x > > > > Any help? > > Regards, > Mahmood > > >
