you most likely wanna update the bios...
http://wiki.soekris.info/Updating_Bios
be aware though, that there is somekind of bug in the bios update
function.. so make sure to hard reset the device..
i believe 1.40h is the one you want, atleast last time i checked

2011/12/1 ΜΙΧΕΛΙΟΥΔΑΚΗΣ ΝΕΚΤΑΡΙΟΣ <[email protected]>:
> We just purchased a net6501, with mSATA 4GB Card, we have inserted the card, 
> however when we boot we get the following.
>
> comBIOS ver. 1.40a  20110906  Copyright (C) 2000-2011 Soekris Engineering.
>
> net6501
>
> 2048 Mbyte Memory                        CPU Atom E6xx 1615 Mhz
>
>
> Initializing Intel(R) Boot Agent GE v1.3.72
> PXE 2.1 Build 089 (WfM 2.0)
>
> SATA AHCI BIOS ver. 0.6 20110902  Copyright (C) 2003-2011 Intel Corporation
>
> Controller Bus#02, Device#06, Function#00: 02 Ports
> No device found
>
>
>
> Is there something else I should be doing, for the net6501 to see the mSATA 
> 4GB Card?
>
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