That would be more to my liking as well, but the change I just made was only restoring the current longstanding behavior. Going to the more logical .pep.shtml will take a bit more doing.
Brian _____ From: [email protected] [mailto:[EMAIL PROTECTED] On Behalf Of David Shteynberg Sent: Thursday, October 16, 2008 2:51 PM To: [email protected] Subject: [spctools-discuss] Re: ProteinProphet Hi Brian, It looks like you just committed a fix that changed the interactxsl file to interact.xsl. However, for consistency reasons shouldn't we be naming all peptide level results with a .pep. before the final extension. So instead of generating files interact.xsl and interact.shtml, these should be named interact.pep.xsl and interact.pep.shtml, respectively. Can you make this correction to the code? Thanks, -David On Thu, Oct 16, 2008 at 2:04 PM, Brian Pratt <[EMAIL PROTECTED]> wrote: At a minimum the interactxsl thing is mine, most likely the other as well. Fixes soonest. _____ From: Brian Pratt [mailto:[EMAIL PROTECTED] Sent: Thursday, October 16, 2008 1:56 PM To: '[email protected]' Subject: RE: [spctools-discuss] ProteinProphet I've been pretty active the checkins lately, I'll check to make sure it's nothing I did. _____ From: [email protected] [mailto:[EMAIL PROTECTED] On Behalf Of Eric Deutsch Sent: Thursday, October 16, 2008 1:51 PM To: [email protected] Cc: 'Eric Deutsch' Subject: [spctools-discuss] ProteinProphet Hi everyone, I was just doing a little processing using the latest trunk code on Linux and interact.prot.shtml has gone missing! There's also an interactxsl file that seems to have lost a period. Any recent changes that might have caused this? I also get this error: perl: symbol lookup error: /tools/bin/TPP/tpp-dshteynb/cgi-bin/tpplib_perl.so: undefined symbol: Perl_Gthr_key_ptr command "perl /tools/bin/TPP/tpp-dshteynb/cgi-bin/protxml2html.pl -file "/regis/sbeams/archive/edeutsch/TestSamples1/Processed/01/XTK_HsIPI3.38ForwD ecoy /interact-prob.prot.xml" 336" failed with exit code 32512 --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [EMAIL PROTECTED] For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
