Hi guys, I am having a difficulty again with the TPP funtions. This time the ProteinProphet would not work when I tried on the Tutorial data.
Here is the failure message: ProteinProphet c:/Inetpub/wwwroot/ISB/data/Tutorial/raft.pep.xml c:/ Inetpub/wwwroot/ISB/data/Tutorial/raft.prot.xml XPRESS ASAP_PROPHET ProteinProphet (C++) by Insilicos LLC and LabKey Software, after the original Perl by A. Keller (TPP v4.2 JETSTREAM rev 0, Build 200902190939 (MinGW)) (xml input) (XPRESS) (ASAPRatio) (report Protein Length) (using degen pep info) . . . reading in c:/Inetpub/wwwroot/ISB/data/Tutorial/ raft.pep.xml. . . . . . read in 0 1+, 59 2+, 76 3+, 0 4+, 0 5+, 0 6+, 0 7+ spectra with min prob 0.05 * * * cannot find database for getProteinLens * * * Command FAILED In the message "database for getProteinLens" was reported missing. Do you know what this database is? I have the ipi.Human database in this location: C:\Inetpub\wwwroot\ISB\data\Tutorial\dbase\IPI, which should be the default for the tutorial data. Any advice is highly appreciated. Have a great weekend! Xin --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to spctools-discuss@googlegroups.com To unsubscribe from this group, send email to spctools-discuss+unsubscr...@googlegroups.com For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
