Eli,

PS-- probably you have seen that the same options you have in
MassHunter for deisotoping are available for the trapper converter
when run from the command-line?

-Natalie


On Mon, May 4, 2009 at 2:09 AM, Ilya.Agron <ilya.ag...@gmail.com> wrote:
>
> to Natalie:
> I've downloaded the latest version of TPP and reinstalled it.
> Strange, it doesn't process anything. When I start it from browser (or
> from command line) with 'msLevel'=1. It outputs:
> COM=Conversion of MasKate1-r005.mzXML to mascot generic
> CHARGE=2+ and 3+
>
> And nothing after.
>
> to Matt:
> We need it to get deisotoped and deconvoluted data; and then comparing
> it with initially got mzXML-file (trapper.exe) on the basis of the
> mass and abundance,
> we convert it to mgf-file with retention times.
>
> Thanks for quick reply!)
>
> -Eli
>
> >
>

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