Hi everyone, Just a thought.....i understand Libra only works on peptides with p>=0.5. But do i necessarily have to specify p=0.5 for Peptide Prophet? I noticed there are Libra results in the interact.pep.xml file, but ProteinProphet did not capture it in the prot.xml file. Is that the reason why LibraProteinratioparser failed? Would setting p=0.5 for PeptideProphet make LibraProteinratioparser work?
Thanks! Bernt On Aug 12, 5:59 pm, Bernt <[email protected]> wrote: > Hi everyone, > > Librapeptideparser works fine, but when i used the command > libraproteinratioparser interact.prot.xml -ccondition.xml, the process > hangs and a windows error msg pops up saying "Libraproteinratioparser > has encountered a problem and needs to close". > > Could anyone kindly offer some advice? > > Bernt --~--~---------~--~----~------------~-------~--~----~ You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected] To unsubscribe from this group, send email to [email protected] For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en -~----------~----~----~----~------~----~------~--~---
