Bash On Aug 20, 11:55 pm, "Brian Pratt" <[email protected]> wrote: > We basically tried that already: Eliza says the suggested > > export PWD=/opt/trans_proteomic_pipeline/src ; make all install > > did not work. She also tried the "SRC_ROOT= $(shell pwd)" change to the > makefile. There's something deeper going on. > > Eliza, what shell do you use? I do see from googling that $PWD might be > bash-specific, possibly there are other unintended bash dependencies. > > Brian > > -----Original Message----- > From: [email protected] > > [mailto:[email protected]] On Behalf Of Mike Coleman > Sent: Thursday, August 20, 2009 1:26 PM > To: spctools-discuss > Subject: [spctools-discuss] Re: Failure with make > > Eliza, > > I'm still suspicious about the $PWD thing. If you're running 'make' > normally, you might try something like > > $ PWD=$(pwd) make ... > > instead of just > > $ make ... > > to see whether that improves your situation. Alternatively, for the > 'root' steps, you could do something like > > $ sudo PWD=$(pwd) make ... > > Mike
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