hey brian,

i will try to generate a smaller set in the next days in case i do not
succeed with splitting up the data.

cheers,
andreas

On Mon, Sep 28, 2009 at 5:14 PM, Brian Pratt <[email protected]>wrote:

> oops, typo
>  ftp://insilicos.serveftp.net/pub
>
> On Mon, Sep 28, 2009 at 8:13 AM, Brian Pratt <[email protected]>wrote:
>
>> I'd be happy to look at a much smaller but otherwise similar data set for
>> any clues - you can send to ftp://insilics.serveftp.net/pub
>>
>> Brian
>>
>>   On Mon, Sep 28, 2009 at 8:08 AM, Andreas Quandt <
>> [email protected]> wrote:
>>
>>> hi matt,
>>>
>>> this was also my first thought but the memory usage was at about 8 GB of
>>> 48GB which are available on that system....
>>>
>>>
>>> cheers,
>>> andreas
>>>
>>>  On Mon, Sep 28, 2009 at 4:55 PM, Matthew Chambers <
>>> [email protected]> wrote:
>>>
>>>>
>>>> HI Andreas,
>>>>
>>>> It sounds like it used up all the system memory and started thrashing
>>>> the disk (constantly paging things in and out to the swap file) which
>>>> slows down any operation tremendously. Quite possibly the parser wasn't
>>>> designed for files that big (maybe it's storing something internally
>>>> that's taking up too much space?).
>>>>
>>>> -Matt
>>>>
>>>>
>>>> Andreas Quandt wrote:
>>>> > dear list,
>>>> >
>>>> > i tried to convert a mscot dat file of > 7gb and it took several days.
>>>> > hence, i would like to ask if any of you knows how to speed this up?
>>>> >
>>>> > cheers,
>>>> > andreas
>>>>
>>>>
>>>>
>>> >>>
>>>

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