Dear All, I am trying to analyze InSpecT results on pepxml format with TPP. I copied below the error message that TPP generates. Any help will be greatly appreciated.
Cheers, Cristian run_in c:/Inetpub/wwwroot/ISB/data/try; c:\Inetpub\tpp-bin\xinteract -Ninteract0209.pep.xml -p0.05 -l7 -O c:/Inetpub/wwwroot/ISB/data/try/ writeto.pep.xml -------------------------------------------------------------------------------- c:\Inetpub\tpp-bin\xinteract (TPP v4.3 JETSTREAM rev 1, Build 200909091257 (MinGW)) running: "C:/Inetpub/tpp-bin/InteractParser "interact0209.pep.xml" "c:/ Inetpub/wwwroot/ISB/data/try/writeto.pep.xml" -L"7"" file 1: c:/Inetpub/wwwroot/ISB/data/try/writeto.pep.xml processed altogether 10897 results results written to file c:/Inetpub/wwwroot/ISB/data/try/ interact0209.pep.xml direct your browser to http://localhost/ISB/data/try/interact0209.pep.shtml command completed in 8 sec running: "C:/Inetpub/tpp-bin/PeptideProphetParser "interact0209.pep.xml" MINPROB=0.05" (InsPecT) WARNING!! The discriminant function for Inspect is not yet complete. It is presented here to help facilitate trial and discussion. Reliance on this code for publishable scientific results is not recommended. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. WARNING: Inspect only support semi-parametric PeptideProphet modelling, which relies on a DECOY search. init with InsPecT None MS Instrument info: Manufacturer: UNKNOWN, Model: ESI-ION-TRAP, Ionization: UNKNOWN, Analyzer: UNKNOWN, Detector: UNKNOWN PeptideProphet (TPP v4.3 JETSTREAM rev 1, Build 200909091257 (MinGW)) akel...@isb read in 938 1+, 4815 2+, 3088 3+, 0 4+, 0 5+, 0 6+, and 0 7+ spectra. Initialising statistical models ... Iterations: .........10.........20 command "C:/Inetpub/tpp-bin/PeptideProphetParser "interact0209.pep.xml" MINPROB=0.05" failed: Unknown error command "C:/Inetpub/tpp-bin/PeptideProphetParser "interact0209.pep.xml" MINPROB=0.05" exited with non-zero exit code: -1073741819 QUIT - the job is incomplete command "c:\Inetpub\tpp-bin\xinteract -Ninteract0209.pep.xml -p0.05 - l7 -O c:/Inetpub/wwwroot/ISB/data/try/writeto.pep.xml" failed: Unknown error Command FAILED -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
