My .out Data looks just like the .dta I posted. But I found a sequest.txt file inside my .out DIR with the following lines:
SEQUEST v.28, (c) 1998-2009 Failed to initialize FLEXnetWrapper On 25 Feb., 17:29, Jimmy Eng <[email protected]> wrote: > There is no date/version information within the dta peak lists file. > The real question is what do your Sequest search result .out files > look like that were used as input to generate the pep.xml? > > On Thu, Feb 25, 2010 at 4:22 AM, BIackEye <[email protected]> wrote: > > I'm sry, > > > didnt realize i was writing in german into an english forum. > > Anyway, maybe there is sth wrong with my dta, cause there is absolutly > > no stamps (Date, Version etc.) on the top. > > I read in other posts, that the pepXML converter is pretty static > > about the files he accepts for dta's. > > Maybe there is sth buggy with my Sequest search engine. > > > with best regards > > Blacky > > > On 22 Feb., 18:13, Jimmy Eng <[email protected]> wrote: > >> Die pepXML Akte ist zu klein. Es gibt keine Suchresultate in der Akte. > >> Fokus auf, wie diese Akte erzeugt wurde. > > >> (I thought it would be cute to reply in German. The above is a babel > >> fish translation of: "The pepXML file is too small. There are no > >> search results in the file. Focus on how that file was generated.") > > >> On Mon, Feb 22, 2010 at 8:05 AM, BIackEye <[email protected]> wrote: > >> > Ich habe ein Problem mit den pepXML Dateien. Irgendwie sehen die zu > >> > klein aus, und die Analyse startet auch nicht. > >> > Hier mal der Fehlerbericht: > >> > --------------------------------------------------------------------------------------------------------- > >> > # Commands for session ZBTP4364S on Mon Feb 22 16:57:49 2010 > >> > # BEGIN COMMAND BLOCK > >> > ###### BEGIN Command Execution ###### > >> > [Mon Feb 22 16:57:49 2010] EXECUTING: run_in c:/Inetpub/wwwroot/ISB/ > >> > data; c:\Inetpub\tpp-bin\xinteract -Ninteract.pep.xml -p0.05 -l7 -O > >> > c:/Inetpub/wwwroot/ISB/data/0010-100208NiLeGb01TD.pep.xml > >> > OUTPUT: > > >> > c:\Inetpub\tpp-bin\xinteract (TPP v4.3 JETSTREAM rev 0, Build > >> > 200908071234 (MinGW)) > > >> > running: "C:/Inetpub/tpp-bin/InteractParser "interact.pep.xml" "c:/ > >> > Inetpub/wwwroot/ISB/data/0010-100208NiLeGb01TD.pep.xml" -L"7"" > >> > file 1: c:/Inetpub/wwwroot/ISB/data/0010-100208NiLeGb01TD.pep.xml > >> > processed altogether 0 results > > >> > results written to file c:/Inetpub/wwwroot/ISB/data/interact.pep.xml > > >> > direct your browser tohttp://localhost/ISB/data/interact.pep.shtml > > >> > command completed in 1 sec > > >> > running: "C:/Inetpub/tpp-bin/PeptideProphetParser "interact.pep.xml" > >> > MINPROB=0.05" > >> > (SEQUEST) (icat) > >> > MS Instrument info: Manufacturer: Thermo Scientific, Model: LTQ > >> > Orbitrap Discovery, Ionization: NSI, Analyzer: FTMS, Detector: unknown > > >> > command "C:/Inetpub/tpp-bin/PeptideProphetParser "interact.pep.xml" > >> > MINPROB=0.05" failed: Unknown error > > >> > command "C:/Inetpub/tpp-bin/PeptideProphetParser "interact.pep.xml" > >> > MINPROB=0.05" exited with non-zero exit code: 255 > >> > QUIT - the job is incomplete > > >> > command "c:\Inetpub\tpp-bin\xinteract -Ninteract.pep.xml -p0.05 -l7 -O > >> > c:/Inetpub/wwwroot/ISB/data/0010-100208NiLeGb01TD.pep.xml" failed: > >> > Unknown error > >> > END OUTPUT > >> > RETURN CODE:65280 > >> > ###### End Command Execution ###### > >> > # All finished at Mon Feb 22 16:57:52 2010 > >> > # END COMMAND BLOCK > >> > ----------------------------------------------------------------------- > >> > Hier meine pep,pep.xml und eine tga Datei: > >> > [url=http://uploading.com/files/ > >> > b12b2ac4/0010-100208NiLeGb01TD.pep.xml/] Download > >> > 0010-100208NiLeGb01TD.pep.xml for free on uploading.com[/url] > >> > [url=http://uploading.com/files/ > >> > fm325f39/0010-100208NiLeGb01TD.pep.xml/] Download > >> > 0010-100208NiLeGb01TD.pep.xml for free on uploading.com[/url] > >> > [url=http://uploading.com/files/61md3e1d/0010-100208NiLeGb01TD. > >> > 00331.00331.3.dta/] Download 0010-100208NiLeGb01TD.00331.00331.3.dta > >> > for free on uploading.com[/url] > > >> > -- > >> > You received this message because you are subscribed to the Google > >> > Groups "spctools-discuss" group. > >> > To post to this group, send email to [email protected]. > >> > To unsubscribe from this group, send email to > >> > [email protected]. > >> > For more options, visit this group > >> > athttp://groups.google.com/group/spctools-discuss?hl=en. > > > -- > > You received this message because you are subscribed to the Google Groups > > "spctools-discuss" group. > > To post to this group, send email to [email protected]. > > To unsubscribe from this group, send email to > > [email protected]. > > For more options, visit this group > > athttp://groups.google.com/group/spctools-discuss?hl=en. -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. 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