Forwarding to proteowizard support list, asTPP uses the official pwiz msconvert binary instead of building its own...
On Tue, Nov 30, 2010 at 4:55 AM, Njuguna <[email protected]> wrote: > We have been running msconvert to convert our raw files to mzXML > format and then latter on compressing the files using gzip. > We would like to simplify the conversion process by using only 1 tool > and 1 command to do so. However when we downloaded the latest windows > version (2.1.2393 ) from sourceforge and ran it with and without the > compression option we got very different time frames. With 130 Mb raw > files these were converted to plain mzXML files (without the > compression option) in an average 8 minutes then using gzip they were > zipped in an average 3 minutes (Total time an average of 11 minutes). > When they are converted with the compression option they take 38 to 40 > minutes to convert. Why is this? I thought it should take less time > when running them with the -g option. > > I am using an Amazon Windows 2003 server Small Instance. The > proteowizard version is 2.1.2393 artifact is pwiz-bin-windows-x86-vc90- > release-2_1_2393.tar.bz2 that is 21.57 Mb in size checked in on 26 > November 2010. > > -- > You received this message because you are subscribed to the Google Groups > "spctools-discuss" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/spctools-discuss?hl=en. > > -- You received this message because you are subscribed to the Google Groups "spctools-discuss" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/spctools-discuss?hl=en.
