Yes, I think it should be matched through all your analysis. -- Taejoon

On Saturday, November 2, 2013 5:40:24 PM UTC-5, ato wrote:
>
> Hi 
> I am running the apex for protein quantification after TPP analysis. My 
> concern is regarding the min. peptide lenght (building training data). 
> Should it be the same as we used in TPP during data analysis (Minimum 
> peptide length)? What do you think?
>
> Thank you!
>

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