Hi All,
I want to use Libra for iTRAQ-8plex quantification. But I wonder:
1. Whether Libra can support to select different reporter as the reference 
at the same time, such as 115/114, 116/114, 116/115. I don't find the 
function so far.
2. Does Libra calculate p-value for each protein ration? I don't find the 
p-value for protein ratio in the output file (interact.ipro.prot.xls). Many 
iTRAQ quantification software can provide p-value for protein ratio, such 
as isobar, IsobariQ and ProteinPilot.
3. If I don't have mzXML or mzML file, can Libra do iTRAQ quantification?
Many thanks and best regards!
Bo

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