Dear Prof Lam,
I have received your email. We are interested but we have label-free
comparative analysis by SWATH-5600 TTOF (ABSCIEX) method. Could it be
useful or you are interested only in Orbitrap Data?
Best regards,
Silvia
On 15/12/2014 06:36, Henry Lam wrote:
Dear fellow proteomics researchers,
You are all invited to participate in the following community-wide
study. If you regularly perform label-free quantitative proteomics
experiments, or you simply want to learn how to do it, this is a great
opportunity.
Please feel free to circulate among your friends, students or
colleagues who might be interested. The study is open to all.
Henry
——————————————————————————————
The Proteome Informatics (iPRG) 2015 study is officially launched today!
The Proteome Informatics Research Group (iPRG) of the Association of
Biomolecular Resource Facilities (ABRF) invites you to participate in
a collaborative data analysis study to evaluate software and
statistical methods for label-free quantitation. Participants will be
asked to detect proteins that exhibit significant differences in
abundance in a yeast whole-cell lysate and report protein abundance
ratios between pairs of four samples, each represented by three
technical replicates, analyzed by a quadrupole-orbitrap mass
spectrometer. The study will primarily focus on post-identification
processing steps, such as filtering false positives, computing the
quantitative metrics, assembling peptide-level information to estimate
protein abundance ratios, and statistical assessment
To participate in this study, please go to:
http://www.abrf.org/index.cfm/group.show/ProteomicsInformaticsResearchGroup.53.htm
<http://www.abrf.org/index.cfm/group.show/ProteomicsInformaticsResearchGroup.53.htm>
Sincerely,
The ABRF Proteome Informatics Research Group (iPRG)
Eugene Kapp – Walter and Eliza Hall Institute of Medical Research
(Co-chair)
Henry Lam – Hong Kong University of Science and Technology (Co-chair)
Brett Phinney – UC Davis (ABRF Executive Board Liaison)
John Cottrell – Matrix Science Ltd
Michael Hoopmann – Institute for Systems Biology
Sangtae Kim – Pacific Northwest National Laboratory
Thomas Neubert – New York University
Magnus Palmblad – Leiden University Medical Center
Olga Vitek – Northeastern University
Sue Weintraub – University of Texas Health Science Center at San Antonio
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